Tympanuchus pallidicinctus (lesser prairie-chicken): 128078355
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Entry
128078355 CDS
T08967
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04510
Focal adhesion
tpai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128078355
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128078355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_I
F5_F8_type_C
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
128078355
NCBI-ProteinID:
XP_052534421
LinkDB
All DBs
Position
Unknown
AA seq
1827 aa
AA seq
DB search
MDVLVLALLLAGVPAAGGWEEPDPSQGCARGSCYPATGNLLVGRARQLSASSTCGLQGPQ
EYCIVSHLQDSEKCFTCDSRNPALRESHRIENVIYLHGPHSERSWWQSENGVEHVSIQLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGRSWKTYHYFAYNCSKLFPSIPTHPSGHIG
EVLCEQRYSEIEPSSHGEVIFKVLDPSIPVVDPYSPSIQELLRVTNLRVNLTKLHTLGDN
LLDSRQEVLHKYYYAVDELVMRGSCFCHGHAAECATAPGAPPSVPGMIHGRCVCKHHTQG
LNCERCEDFYHELPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQ
HNTMGRRCHLCKPFYYRHPRSDIRAPTACIPCDCDPAGSLDGGACDAHTDVALGMIAGQC
RCKENVAGPRCDRCRHGAYGLSQGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVA
GRSCSQCVPEFWGLSYDVGGCRPCSCDFGGAYSNRCSMEDGACPCRPHLMGRQCDQVQPG
FFCAPLDHYTYEAEQAVGRGPSHPQLPGAVRAEVPQDCPQHRSGDPAGRKARARPQRSPP
RSPQPRAAPRHSLQQPPKPDVEPVLRDGDGRMVTWTGLGFARVRDGAGLTFHVDNVPYPM
EYELLLRYEPESAEDWEAVVSISSRALPTGPRCGNLLPSEQMYHEGLPHSQRYVLLSQPF
CFEPSTPYEVTVRLQRASVTQRHPSAFILIDSLVLLPRVPELPGFHGAAVEAVQRLEELE
RYRCLEAFHMAPPHTLAEACARLVCSVSAVLHDGALPCQCDPQGSRSSVCQVLSGQCECK
PHVLGRRCDRCAPGSYGFGPLGCSPCACSPEGSVSQLCDAGSGQCRCQPGVMGRQCDRCQ
PGHWGFPSCRPCQCNGHAEECDLRTGSCLRCRDHTTGRHCERCQDGYYGDPVLGSGQQCR
PCPCPGYPGTRHYHGSACHADEETHHIVCLCAPGYTGPRCDRCSPGYFGTPEMEGGVCRP
CQCNNNIDTSDPGACDPHTGHCRRCLYHTAGPRCAQCQPGYFGNALQRSCRRCSCDPRGT
LSAHCTAGTCSCDRATGACACRANVVGRSCDRCAPNFWNLGGTEGCQPCGCHAMHATHPA
CDEVTGQCHCHLGFGGRVCSQCQENHWGDPELQCRACECEPLGAESPQCDRASGQCQCRP
GFGGLRCDRCQRGYQAAFPRCSPCHPCFGHWDAVLGSLQDGLQHLGARVRALHEGGSAAP
LSPRLRALEEALKHAERLLGEGSSPSSPLLQELAGQLDGSRTELDNFWKRLQELEQHVDQ
LEQADVLHHSRLARLSHELGGLNQTTSHLQAVLGTVTTAGFRESYQSIVVAARDSRQAEV
VANGTAGELNAARATQWAAEQALQQRGDAFRRSMAAQRKSLRETQKRASGLSVTGINEKI
CGAPGDRSCAESLCGGALCRDSVGMRHCGGVGCTGALPVSAQALSSARNASQQLEVALGQ
LSAVTQKMQEVQDLARGARSRAEEALERSQAARSRTEKATAQLRDFIRRIKAFLSEEGAD
PGSIELVARQVLNISLPSSPAHIQELLQEMQESISQLDGVDAVLNGTAQGLEAAQGLLAQ
GQDARERAEGVRDELAETQLALQVAQAQVMAAGSTLRRAKDGIRAAEGKVREAERRLQAL
QGKESRLQRRLRELAQRVTALQQRGRDARRLAQDAKDGAQRATAASRTLSQDLAQVTRRY
VVLKDRVSGMAGMAGGALQRVTRLTAEARDLLDKANSSKKRLEELEQHFGANEQAMAAKA
TRLQALERQVSGLLQEIRERANAYATC
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctggtcctcgctctcctcctggcgggggtgccagcagcagggggctgggag
gagccagatccatcccagggctgtgcccgtggcagctgctacccggccaccggcaacctg
ctggtggggagagctcggcagctcagcgcctcgtccacctgcgggctgcaggggccccag
gagtactgcatcgtcagccatctccaggactctgagaaatgcttcacctgtgactcacga
aacccggccctgcgtgagagccaccgcattgagaacgtcatctacctgcacggcccccac
agcgagaggagctggtggcagtcggagaatggcgtggagcacgtcagcatccagctggac
ctggaaggcgagttccacttcacacacctcatcatgaagttcaagaccttccgccccgca
gccatgctggtggagcgctcggccgactttggccgcagctggaagacgtaccactacttc
gcctacaactgctccaagctcttccccagcatccccacacatccctcggggcacataggc
gaggtgctgtgtgagcagcgctactctgagatcgagccctccagccacggcgaggtcatc
ttcaaggtgctggatccctccatcccagtggtggacccgtacagtcccagcatccaggag
ctgctgcgtgtcaccaacctgcgtgtgaacctcaccaagctgcacacgctgggggacaac
ctgctcgactcacggcaggaagtgctgcacaaatactactatgctgtggatgagctggtg
atgcgtgggagctgcttctgccacggccacgctgctgagtgtgccactgcacctggtgct
ccgccatctgtccctggcatgatccacgggcgctgtgtctgcaagcaccacacgcagggg
ctgaactgtgagcgctgcgaggacttctaccacgagctgccctggcgcccggctgagggc
tccagcaccaacgcctgccgccggtgcgactgcaacgagcactcacggcgctgccacttc
gacatggccgtgttcctggccaccgggaacaccagcggggccgtgtgcgatggctgccag
cacaacaccatggggcgccgctgccatctctgcaagcccttctactaccggcacccgcgc
tccgatatccgcgctcccactgcctgcatcccgtgtgactgcgaccctgcgggatcgctg
gatggcggtgcctgcgatgcacacacggacgtggcgctgggcatgatcgcggggcagtgc
cgctgcaaggagaacgtggccgggccacgctgcgaccgctgccggcacggagcctacggc
ctcagccagggagaccctcagggctgccagccgtgccggtgtgacccacggggcacggtg
gcgggcagctccccctgtgaccccatcagcggggactgctactgcaagcgcttcgtggcc
gggcgctcctgcagccagtgcgtgcctgaattctggggcctgagctatgatgtagggggc
tgccggccctgctcctgtgacttcgggggagcttacagcaaccggtgctccatggaggac
ggggcctgtccctgccgcccccacctcatgggccggcagtgtgaccaggtgcagcccggc
ttcttctgcgcaccccttgaccactacacctacgaggctgagcaagccgtgggccgcggg
cccagccatccccagctcccaggcgccgtgcgggcagaggtgccccaggactgcccccag
caccgcagtggggacccagcggggcggaaagcacgtgctcggccccagcgcagccctccc
cgctccccccagccccgcgcagccccacgccacagcctccagcagccccccaagcccgac
gtggagccggtgctgcgagatggggacgggcgcatggtgacgtggactggactggggttt
gcccgtgtgcgggatggagccgggctgacattccatgtagacaacgtgccctaccccatg
gagtacgagctgctgctgcgttatgagcctgagtcagccgaggactgggaggctgtggtg
agcatcagctcccgggcgctgcccaccggaccacgctgtgggaacctgctgccctcagag
cagatgtaccacgaaggcctgccccacagccagaggtatgtgctgctgtcccagcccttc
tgcttcgagcccagtaccccatacgaagtaactgtgcggctgcagagagccagcgtcacc
cagcgccaccccagtgccttcatcctcatcgactcactggtgctgctgccacgtgtgcca
gagctgccgggcttccacggggcagcagtggaagcggtgcagcggctggaggagctggag
cgctaccgatgcctggaggctttccatatggccccaccgcacaccctggctgaagcctgc
gcccgcctcgtctgcagcgtctcagccgtgctgcacgatggagctctgccctgccagtgt
gacccacaaggctcccgcagcagcgtgtgccaggtgctgtcagggcagtgtgagtgcaag
ccccacgtcctcggccgacgctgtgaccgctgcgcacccggcagctacggctttggaccc
ctggggtgcagcccctgcgcctgctccccggagggctctgtgtcgcagctgtgtgatgcg
ggcagtgggcagtgccgctgccagccgggcgttatgggccggcagtgcgaccgctgccag
ccaggacactggggcttccccagctgccggccctgccagtgcaacgggcacgccgaggag
tgcgacctgcggacgggcagctgcctgcgctgccgagaccacaccaccggccggcactgc
gagagatgccaagatggttattatggagacccggtgctgggctcagggcagcagtgccgc
ccttgtccctgccctggctaccctggcacacggcactaccacgggagcgcctgccatgcc
gacgaggagacccaccacatcgtgtgcctctgcgcgcccggatacaccgggccccgctgc
gaccgctgctccccgggctactttgggacgccggagatggagggaggagtgtgccggccc
tgccagtgcaacaacaacatcgacaccagcgacccgggggcctgtgacccgcacacaggg
cactgccgccgctgcctgtaccacactgccgggccccgctgcgcccagtgccagcccggc
tatttcggcaatgccctgcagcgcagctgtcgccgctgcagctgtgacccgcggggaacg
ctgtctgcccactgcaccgctggcacctgcagctgtgaccgcgctacgggagcctgtgcc
tgcagagccaatgtggtgggcaggagctgcgaccgctgtgcacccaacttctggaacctg
ggggggacggagggctgccagccttgtggatgccatgccatgcatgccacgcaccccgct
tgcgacgaggtcacagggcagtgccactgccacctcggctttggtggccgtgtctgttcc
cagtgccaggagaatcactggggagaccccgagctgcagtgccgagcctgcgaatgtgag
ccactgggtgctgagagccctcagtgcgaccgagccagtgggcagtgccagtgccggcca
ggctttggggggctgcgctgcgaccgctgccagcggggctaccaggccgccttccctcgc
tgctctccatgccacccctgctttgggcactgggatgcagtgctgggcagcctgcaggat
gggctgcagcaccttggggcacgggtacgggcactgcatgagggagggtctgcagccccg
ctcagcccccgcctgcgagcactggaggaggccctgaagcatgcagagcggctgctgggt
gaggggagcagccctagtagccccctcctgcaggagctggccgggcagctggatggcagc
aggacggagctggacaacttctggaagaggcttcaagagctggagcaacacgtggatcag
ctggagcaggctgatgtgctgcaccacagccggctggccaggctgagccatgagttgggt
gggctcaaccaaaccacctcccacctgcaagctgtccttggcaccgtgacaacagcagga
ttcagggagtcataccagagcatcgtggtggcagcacgggactcacggcaggcagaggtg
gtggccaatggcacggcaggtgagctgaatgcagcacgggccacgcagtgggcagctgag
caggccctgcagcagcggggtgatgcgttccgccggagcatggctgcacagcggaaatcc
ctgcgggagacacagaaacgggcgtcagggctcagcgtgactgggatcaatgagaagatt
tgcggggctcctggagaccggagctgtgcagaatcactgtgtggaggagctctgtgccgg
gacagcgtggggatgaggcactgcgggggtgtggggtgcacaggggccctgcccgtgtca
gctcaagccctgagcagtgcccgcaatgcctcacagcagctggaggtggccctgggacag
ctgagtgctgtgacacagaagatgcaggaggttcaggacctggcacggggtgcccgcagc
cgtgcagaggaggcgttggaacgctcacaggctgcccgcagccgcacagagaaagcgaca
gcacagttgcgggacttcatccgccgcatcaaagccttcctgtcggaggagggtgcagat
ccaggcagcatcgagctggtggcgcggcaggtgctgaacatctccctgcccagcagccct
gcacacatccaggagctgctgcaggagatgcaggagagcatcagccagctggatggggtg
gacgcggtgctcaacggcacggcacaggggctggaggctgcacaggggctgctggcacag
ggacaggatgccagggagcgagcagagggcgtgagggacgagctggcggagacgcagctc
gcactgcaggtggcacaggcacaggtgatggcagctgggagcaccctgcggagagccaag
gatggcatccgggctgctgagggcaaagtcagggaggcggagcgcaggctgcaggcgctg
caggggaaggaatcacggctgcagcggcggctgcgggagctggcacagcgcgtcaccgcc
ctgcagcagcgcggacgggacgcccggcgcctggcacaggatgccaaggatggggcgcag
cgtgccaccgccgcctcgaggacgctcagccaggacctggcgcaggtgactcggcgctac
gtggtgctcaaggaccgggtgagcgggatggcagggatggccggcggggccctgcagcgc
gtgacgcggctgacggccgaggccagggacctgctggataaagccaacagcagcaagaag
cggctggaagagctggagcagcacttcggggccaacgagcaggcgatggcggccaaggcg
acgcggctgcaggcgctggagcggcaggtgtcggggctgctgcaggagatccgcgagcgg
gccaacgcgtacgccacctgctag
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