Tympanuchus pallidicinctus (lesser prairie-chicken): 128079156
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Entry
128079156 CDS
T08967
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04020
Calcium signaling pathway
tpai04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128079156 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128079156 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tpai04040
]
128079156 (GRIN2A)
Ion channels [BR:
tpai04040
]
Ligand-gated channels
Glutamate (ionotropic)
128079156 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
128079156
NCBI-ProteinID:
XP_052536083
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MRKIGCALLVLQALLAPLDLVHGAEKNYPVLNIAVILGRTKDITERDIRSLWTREMSADL
TVDVNVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDSDQEAVAQILDFISSQTSIP
ILGIHGGASMIMADKDVMSTFFQFGASIQQEAIVMLKIMQDYDWHVFSLVTTTFPGYRDF
INVIKTTVENSFVGWDMQNIIILDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISASYDEWDYSLEARVRDGLGIIATAA
SAMLEKYSFIPEAKTSCYGQLEKNDRPSHTLHQFMMNVTWEGKDLSFTADGYQAHPRLVV
IVLNKDRVWEKVGKWENNSLSLKYSVWPRYSSFADSDPDDNHLSIVTLEEAPFVIVEDVD
PLMESCQKNTVPCRKFVKINNSTNEGTNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAQGRDPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKYNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYW
KLRFCFTGICSDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFTLTNSQTNMLKLLRTAKN
MTNINPSRINSPKRTADFIQRGSLIMDMVMDKGNLIFSDNRSFQTKDNFFGENMSELQTL
PGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTTEAKVNSRPRQLWRKSVESLRQESV
RQSQGSQRENGSDENRQLSVKSQRYLPEEIVHSDVSETSSRATCHMEPDNNNKHHKTKDN
FKKRTVASKYPKDCSEVELTYLKTKQSSPRDKIYTIDADKEPGFHLDTPQYIENIVLPET
IEYPGVYQDHNDNYRKAEHANRTPMHNEDSLPNNDQYKLYAKHYSLKDKNASLVDMNDRY
RQNSTHCRSCLSNLPTYAGHYSGRSPYKCDACLRMGNLYDIEEDQMLQDTTNLSLPEEIY
DHSWSQNNALQYHKKNKLRISRQHSFDNIADKSREIDLGRPSRSISLKDKEKFLQSSPYA
SMFSVPSSKLLSNKASLLTHALEDSKRSKSLYPIHSEDNPFLHSYRDDQHLSLRRNPADL
YKYSLPTRGRNDNYFRSSIKSTASYCSRDGRIHNDMYISEHVLPYVANRNSVYSTPRVLN
SCSNRRVYKKMPSIESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattggctgtgctctcctggttctccaagctcttcttgcacctttggatctt
gttcatggagcagagaagaattatcctgtcctgaacattgcagtcattctgggaaggacc
aaggatatcacagagagagatatcagatctctctggaccagggagatgtcagcagacctg
actgttgatgttaatgtagtgacccttctggtgaaccagactgaccctaaaagcatcata
acacacgtttgcgacttgatgtcaggtaccaagatccatggagtggtttttggagacgac
tctgatcaggaggcagtagctcagattttggattttatttcatctcagacttctattcca
attcttggaattcatggcggggcctccatgataatggcagataaggatgtgatgtcaaca
ttcttccaatttggggcttctatccagcaggaagccatcgtcatgcttaagatcatgcag
gattatgactggcacgtgttttctctggtaaccaccacctttcctggatatcgagacttc
atcaatgtcattaagaccacagtggaaaatagttttgttggatgggacatgcagaacatc
atcattcttgatactgcctttggagatgccaagacacaaattcagctgaagaaaattcat
tcatctgtcatccttctctattgttccaaggatgaagctgtctacatactagatgaggct
cgctcactgggccttaccgggtatgatttcttttggatagttccaagcctggttagtggt
aacacagaaattactcccaaggaatttccttcgggactcatttcagcatcttatgatgaa
tgggactacagtttagaagctcgagtgcgggatggccttgggattattgccactgctgca
tcagccatgctggaaaagtactccttcattcctgaagcaaaaactagctgctatggtcaa
ctggagaaaaacgaccggccatctcacactttgcaccagtttatgatgaatgtgacttgg
gaaggtaaagatttgtccttcactgccgacggttatcaggcacaccccaggctggtggtg
atcgtactgaacaaagatcgtgtgtgggagaaggtggggaaatgggagaacaactcactg
agcctgaagtactctgtctggccaaggtacagttcttttgcagacagtgacccagatgat
aaccacctgagtattgtcaccctggaggaggctccctttgtcatcgttgaagatgtggat
cctttgatggaaagctgccaaaaaaacactgtgccatgtcgtaaatttgtcaaaattaac
aactcaactaatgagggaactaatgtaaagaagtgctgcaaaggattctgcattgatatc
ttgaagaagttgtctaaaactgtcaaattcacatatgacctgtacttggtgactaatggg
aagcatggcaaaaaagtcaataatgtgtggaatggaatgattggtgaagtggtttatcat
cgtgcagttatggctgtggggtctctcactattaacgaagagcgctctgaagtggttgac
ttttcagtgccatttgttgagactgggatcagtgtcatggtgtcacggagcaatggcaca
gtttcaccatctgcttttctagagccttttagtgcttctgtctgggtgatgatgtttgtg
atgcttctcattgtgtctgccatggctgtatttatatttgagtacttcagtcctgtagga
tataacaggaatttagcacaagggagagatccccatggaccatccttcaccattggaaag
gcagtatggttactctggggcttggtattcaacaactccgtgcctgtgcaaaaccccaaa
gggacaaccagtaaaattatggtgtcagtttgggccttctttgctgtcattttcctggct
agttatactgccaacttagctgcatttatgattcaagaggagtttgttgaccaagtgaca
ggactgagcgataaaaagtttcaaaggccacatgattattcacctccttttcgatttgga
actgtcccaaatggcagcacagaaaggaatatcagaaacaactaccctgatatgcacctc
tacatgacaaaatataatcaaaaaggagttgaagatgccttggtcagcttgaaaactggg
aagttggatgctttcatctatgatgcagcagtgctgaattacaaggctggaagagatgaa
ggctgcaaacttgtcacaataggcagtggatacatctttgccactacaggctatggaata
gcacttcagaaagggtcaccgtggaagagacaaattgatctcgcccttcttcaatttgtt
ggagatggtgaaatggaagagttagaaaccctgtggctgactggtatttgccacaatgag
aagaatgaagtcatgagcagccagctggatattgacaacatggcaggagtcttttacatg
cttgcagcagccatggcgctcagtttaattacttttgtctgggagcacttattttactgg
aagcttagattctgcttcactggaatctgctctgatagaccaggattattgttctcaatc
agcaggggtatttatagctgcattcatggagtacacattgaagaaaaaaagaagtcccct
gactttactttgaccaattcccaaaccaacatgttaaaactactacgaacagcgaaaaat
atgaccaatataaatccttcaagaattaactcccccaaaagaacagctgattttattcag
aggggttccttgattatggacatggtcatggataagggaaacttgatcttttctgataac
agatcctttcagacaaaggacaacttttttggtgaaaacatgagtgaattgcagacactt
cctggcaatcgacacaaggacaatcttaacaactatgttttccaaggtcagcatcctctc
acactgaatgaatccaacccaaatacagtagaggttgcagtaacaacagaagcaaaagta
aactccagacccaggcaactttggaggaaatctgttgaatctttacgtcaggaatctgta
cgtcagagtcaaggttcccagagggaaaacgggtcagatgaaaaccggcaactttcagtg
aaaagccaaagatatcttcctgaagagattgtccattcagatgtatcagagacatcaagc
cgggctacttgccatatggaacctgataacaacaataagcaccacaaaaccaaggacaat
tttaaaaaaagaacagtagcatcaaaatacccaaaggactgtagtgaagtggaactgaca
tatctgaaaaccaagcagagctctccacgagataaaatctacacaattgatgctgataag
gagccaggattccacttggacacaccccaatatatcgaaaacattgtccttccagaaact
atagagtatcctggtgtttatcaagatcacaatgacaactacaggaaagcagaacatgct
aacaggactcccatgcataatgaagacagtcttccaaataatgatcaatataaactttat
gcaaagcactacagtttaaaagataaaaatgcttccctagttgacatgaatgatagatac
agacagaattctacccactgtaggagctgtctttccaatttgcccacttatgcgggacat
tattcaggcagatctccctataaatgtgatgcatgcttgcggatggggaacctctatgat
attgaggaagatcagatgctgcaggacacaacgaacttatcacttcctgaagaaatatat
gaccatagttggtcacagaataatgctctgcaatatcataaaaaaaacaagttgaggatt
agcaggcaacattcatttgataatattgctgataagtccagggaaattgatcttggaaga
ccttctcgtagtataagcttgaaagataaagagaagtttctccaaagtagtccatatgca
agcatgtttagtgttccctcaagcaaactgttgagcaacaaagcctcacttttaacccat
gctctagaggacagtaagaggagcaagtccctgtatcccattcactcagaagataatccc
tttctgcactcgtatcgtgatgaccagcacttatctcttaggcgaaatccagctgatctt
tataaatattcgttaccaaccagaggaagaaatgataattatttcaggtcatccataaag
tctacagcatcatactgttccagggatggtcggatccataatgacatgtacatttcagag
catgttttgccttatgttgcaaataggaatagtgtgtattcaactccaagggttttaaat
tcctgtagcaatagacgtgtgtataagaaaatgcctagcattgaatcagatgtttaa
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integrated database retrieval system
