Tympanuchus pallidicinctus (lesser prairie-chicken): 128080171
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Entry
128080171 CDS
T08967
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00310
Lysine degradation
tpai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128080171 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpai03036
]
128080171 (SMYD1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
128080171 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
128080171 (SMYD1)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128080171 (SMYD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
COA8
pulA_all-beta
Motif
Other DBs
NCBI-GeneID:
128080171
NCBI-ProteinID:
XP_052538063
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MTRGGMESVEVFTTEGKGRGLKAQKEFLPGDVIFAEPAYAAVVFDSLTHVVCHTCFKRQE
KLHRCGQCKFAYYCDRTCQRDAWLNHKNECSAIKKHGKAPTENIRLAARILWRIEREGSG
LSENCLVSIDDLQNHVENFDEEEKKDLRIDVESFLEFWPAQSQQFGMQYISHIFGVINCN
AFTLSDQRGLQAVGVGIFPNLCQANHDCWPNCTVIFNNGNHEAVRSMFHTQMRIELRALS
KISPGDELTVSYVDFLNVSEERQKQLKKQYYFDCTCEHCKKKIKDDLMLAVKEGDNKPSA
ETVKEVIQFSKDTLEKINKARLEGTYHEVVKLCRECLKKQEPVLGDTNIYLLRILSIASE
VLSYLQMFEEAAEYAKRMVDGYMKIYHPNNAQLGMAVMRAGVTHWHAGLIEAGHSMICKA
YAILLITHGPSHPITKDLEVMRVQTEMELRMFQQNEFMYYKMREAALKNQKIQVMPEPSN
EAPPSLFHKKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccagagggggaatggaatcagttgaagtgttcacgactgaaggcaaaggcaggggc
ttgaaagcacagaaggaattcttgcccggagatgtcatctttgcagagccagcctacgct
gctgtggtttttgatagcctgacacacgtagtctgccacacctgcttcaaacggcaggag
aagctccatcgctgtggccagtgcaagttcgcctactactgtgaccgaacctgccagaga
gatgcctggctgaaccacaaaaatgagtgctctgccatcaagaagcacggcaaggcaccc
acagagaacatcaggctggcagcccgcatcctgtggaggatagagagagagggcagtggg
ctgtcggagaactgcctggtgtctattgatgacctgcaaaaccacgtggagaactttgat
gaggaggagaagaaggacctccgtatcgatgtggaaagcttcttggagttctggccggcc
cagagccagcagtttggcatgcagtatatctcccacatatttggagtgatcaactgcaat
gcctttaccctcagtgaccaaagaggactgcaagctgttggtgtgggaatcttccccaac
ctctgccaggccaaccacgactgctggcccaactgtactgtcatcttcaacaatggcaat
catgaggctgtaagatcaatgttccacacacagatgaggattgagctgcgggcactaagc
aagatctccccaggagatgagctgactgtgtcctatgtggacttcctcaatgtgagtgag
gagcggcagaagcagctgaagaagcagtattactttgactgcacctgtgagcactgcaag
aaaaagatcaaagatgacctgatgctggcagtgaaggagggggacaacaagccttctgca
gagacagtgaaggaagttattcagttctccaaggacacgctggagaagatcaacaaggcc
cgcctggaaggaacttaccatgaagttgtgaagctgtgccgtgaatgcctgaagaaacag
gagcctgtgctgggagacacaaacatctacctcctgaggatcctcagcattgcctctgag
gtcctctcctacctccagatgtttgaggaagcagctgaatatgccaagaggatggtggac
ggctacatgaaaatataccatcctaacaacgcacagctggggatggctgtgatgcgagca
ggagtgacccactggcatgctggcctcattgaagctggacacagcatgatctgtaaagcc
tatgccattctcctgataacccatggaccttcccacccaattaccaaagacctggaggtc
atgcgtgtccagacagagatggagctgcgcatgttccagcagaatgagtttatgtactac
aagatgagggaagctgccctcaaaaaccaaaagattcaagtcatgcctgaacccagcaat
gaggccccaccgagcctcttccacaagaaggaataa
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