Tympanuchus pallidicinctus (lesser prairie-chicken): 128084588
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Entry
128084588 CDS
T08967
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpai02000
]
128084588
Transporters [BR:
tpai02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128084588
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128084588
NCBI-ProteinID:
XP_052546767
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All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MGERCPVPAGPPQHDGGPGATPVPPAHPRDKWSKKMDFLLSVVGFAVDLGNVWRFPYICY
QNGGGAFLIPYTLMAVFGGVPLFYMELALGQFHRTGAIPIWKHICPIFKGIGFAICIIGL
YVSFYYNTIIAWALYYFYSSFSGTLPWASCDNPWNTPNCTNYFGRNNVTWTNFSRSPAEE
FYTRKVLELQKSGGLYNVGGIRWQLLLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYL
VLLILLVRGATLPGAWRGVLFYLRPDWGKLLSTAVWVDAAAQIFFSLGPGFGVLLALASY
NHFHNNCYRDALITSAVNCLTSFLSGFVIFTVLGYMAEMRDVEVEDVARDKGPSLLFITY
PEAIANMVGSTFFAIIFFLMMITLGLDSTFGGLEAVITAVMDEYPQVLAQRRELFVLGLI
TVCFLGSLSTLTYGGAYVVKLLEEFGAGCSILAVVLLETIAVSWFYGIQRFSHDVKAMLG
FTPGLFWKVCWVAVSPALLAFIVASSLLEQPPLALFDYQYPAWSTSLGHLIGASSFICIP
VYMVYKLVWTPGSLKQRLAVCIRPEKTVRDPQAEVVGMEPVL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgggggagcgctgcccggtgcctgctggcccccctcaacacgacgggggtcccggagcc
acccctgtgcccccagcccacccccgggacaagtggagcaagaaaatggatttcctcctc
tcagtcgtcgggtttgccgtcgatctgggcaacgtgtggcgcttcccttacatctgctac
cagaacggagggggagcctttctcatcccatacacgctgatggctgtttttggaggggtg
cccctcttctacatggagctggccctggggcagttccacaggacgggcgccattcccatc
tggaagcacatctgccccatcttcaaaggcatcggttttgccatctgcatcattggcctc
tacgtctccttctactacaacaccatcatcgcttgggctctctattacttctactcatcc
ttctcgggcaccctgccctgggcgagctgtgacaacccctggaacacacccaactgcacc
aactactttgggaggaacaacgtgacctggaccaacttctccaggtccccagctgaggag
ttttatacgaggaaggtcctggagcttcagaagtccggaggtctgtacaacgtggggggg
atccgctggcagctgctcctctgccttttcctcatcttcaccatcgtttacttcagcctg
tggaaaggggtgaaaacctctgggaaggtggtgtgggtgacagccacgctgccttacctc
gtcctgctcatcctgctggtccgcggggccaccctgcctggagcctggaggggggtcctc
ttctacttgcgcccagactggggcaagctgctgagcacagcggtctgggttgatgctgct
gcacagattttcttctccctgggtcctggattcggtgttcttctcgctctggccagttac
aaccacttccacaacaactgctaccgggatgcactcatcaccagtgcagtgaactgcctc
accagcttcctctcgggttttgtcatcttcactgtgctgggctacatggctgagatgcgg
gatgtggaggtggaggatgtagccagagacaaaggtcccagcctgctttttatcacctac
cccgaagccatcgccaacatggtgggatccaccttcttcgccatcatcttcttcctgatg
atgataacgctggggctggacagcacgtttgggggcctggaggccgtgatcaccgccgtg
atggatgaatacccccaggtcctggcccagcgcagggagctcttcgtcctcggcctcatc
acagtctgcttcctgggctcgctgagcaccctcacctacggcggtgcctacgtggtgaag
ctgctggaggagtttggtgctggctgctccatcctggccgtggtgctgctggaaaccata
gctgtgtcctggttctatgggatccagcggttctcccatgacgtgaaagccatgctgggc
ttcaccccagggctgttctggaaggtgtgctgggtggccgtcagccctgccctgctggca
ttcattgtggccagctcgcttctggagcagccacccctggccctttttgactaccagtac
ccagcatggagcacctcactgggacacctcataggagcgtcttccttcatctgcatccct
gtctacatggtgtacaagttggtctggacaccggggtccctcaagcagcgcctcgctgtc
tgcattcggccggagaaaacagtgcgagacccccaggcagaggtggtgggcatggagccg
gtcctgtag
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