Tympanuchus pallidicinctus (lesser prairie-chicken): 128086079
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Entry
128086079 CDS
T08967
Symbol
GLB1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00052
Galactose metabolism
tpai00511
Other glycan degradation
tpai00531
Glycosaminoglycan degradation
tpai00600
Sphingolipid metabolism
tpai00604
Glycosphingolipid biosynthesis - ganglio series
tpai01100
Metabolic pathways
tpai04142
Lysosome
Module
tpai_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
128086079 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
128086079 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
128086079 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
128086079 (GLB1)
00511 Other glycan degradation
128086079 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128086079 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpai04147
]
128086079 (GLB1)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
128086079 (GLB1)
Exosome [BR:
tpai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128086079 (GLB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
128086079
NCBI-ProteinID:
XP_052550264
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MLRLLLPLAGLAELLRAANIPQKTFGIDYGCNCFVKDGRPFRYISGSIHYSRVPRYYWKD
RLLKMKMAGLDAIQTYVPWNYHETQMGVYDFSGDRDLEHFLQLASETGLLVILRAGPYIC
AEWDMGGLPAWLLEKESIVLRSSDSDYLTAVEKWMGVLLPKMKPHLYQNGGPIIMVQVEN
EYGSYFACDYDYLRSLLKIFRQHLGDEVVLFTTDGASQFHLKCGALQGLYATVDFAPGGN
VTAAFLAQRSSEPTGPLVNSEFYTGWLDHWGHRHVVVPSQTIAKTLNEILARGANVNLYM
FIGGTNFAYWNGANMPYMSQPTSYDYDAPLSEAGDLTEKYFALREVIGMYNQLPEGLIPP
TTSKFAYGKIRLQKVGSVVEVLDRLSPSGPVKSTYPLTFVQLKQYFGFVLYRTKLPKNCT
EPTQLSSPLNGVHDRAYVSVDGVQQGVLERDKSLMINITGNAGANLDILVENMGRVNFGR
FNNDFKGLVSNLTLGQDILVEWEMYPLNIDGAVNHFIHGYPGHPKRSDSNPQSYQAPAFY
TGTLSIPGGIPDLPQDTYVKFPGWTKGQIWINGFNLGRYWPARGPQLTLFVPRNILVSSV
PNNITVLELEHSPCSIQLCEIEFVDKPIINATTQYEIDAPPLFVRDTWLSHL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggctgctgctcccgctggccggcctggcggagctcctccgtgcggcgaatata
ccgcagaagacttttgggattgattatggctgcaactgctttgtcaaggatgggcgccct
ttccgttacatctctggcagcattcactattcccgggtgccccggtattactggaaagac
cgcctcttgaagatgaagatggctgggctggatgcaattcaaacgtatgtaccatggaac
taccatgaaacccagatgggcgtgtatgatttttctggtgacagagatctggagcatttc
ctgcagcttgctagtgaaactggcttgctggtgatcctaagagctggaccttacatctgt
gcagaatgggacatgggtggtcttcctgcatggctgttggagaaggaatctattgttctg
agatcttctgattcagattacctgacagcagtggagaaatggatgggggtcctcttgcca
aagatgaagcctcacctctatcaaaatggaggtccaatcatcatggtacaggtggagaat
gagtatggaagctactttgcttgtgactatgactatctgcgttccctcctgaagatcttt
cgccagcatcttggggatgaggtggtgctgttcacaactgatggtgcaagccagtttcat
ttgaaatgtggagctcttcagggtctttatgcgacagtagactttgccccaggtggaaac
gtcacagcagcattcttagctcagaggagcagtgaacctacaggccctttggttaattct
gagttttatactggatggctggatcactgggggcaccgtcacgttgttgtaccctcacaa
actatagctaaaacacttaatgaaatcctggcacgtggtgctaatgttaacctgtacatg
tttataggtggaactaactttgcctactggaatggtgctaatatgccttatatgtcacaa
cccactagttatgactacgatgctccactaagtgaagcaggggatctgactgaaaaatat
tttgctttgagggaggtcattggtatgtataaccagttaccagaaggtcttatccctcca
acaacatccaaatttgcctatgggaagattcgcttgcagaaggtgggcagtgtggtggag
gttcttgataggctgtcaccttctggaccagtgaaaagcacttacccattaacctttgtt
cagctcaagcagtattttggatttgtactgtacagaacgaagcttccaaaaaactgcaca
gagccaacacaactgagttcacctttaaatggagtccacgatcgtgcctatgtctctgtg
gatggggttcagcaaggagtccttgaaagagacaagtcactaatgataaatataactgga
aatgctggagcaaatctggacatcttagtagagaatatgggccgagtcaactttggaaga
ttcaataacgacttcaagggtctagtttcaaatttaactctcggtcaagatattcttgtt
gaatgggaaatgtatcccctaaatatagacggagcagtgaaccatttcattcatggctac
cctggccacccaaagagatctgatagcaatccacagagttaccaagcacctgccttctac
actggtacactttcaattcctggagggattccagacttgcctcaagacacctatgttaaa
tttcctggctggacaaaggggcaaatttggatcaacggctttaatctcggtcgctactgg
ccagcccgtggccctcagttgaccctttttgttccaaggaatatacttgtttcatcagtg
ccaaacaacataacagtgttggagctggagcattctccatgcagcatccagctgtgtgag
atagaatttgtagataaacctattattaatgcaaccacacagtacgaaattgatgcaccc
cccctgtttgttagagacacgtggctgagccatctataa
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