Tympanuchus pallidicinctus (lesser prairie-chicken): 128087931
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Entry
128087931 CDS
T08967
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpai03016
]
128087931 (CDKAL1)
Enzymes [BR:
tpai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
128087931 (CDKAL1)
Transfer RNA biogenesis [BR:
tpai03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
128087931 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Styelin
Motif
Other DBs
NCBI-GeneID:
128087931
NCBI-ProteinID:
XP_052553915
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAQDLKPHDWRYVRKNVFPKVRKRSWKQGTQTDDDPPCDSVIPG
IQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEANKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KNNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFRRVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEQYKFPSLFINQFYPRPGTPAAKMHQVPAVVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPMLMGKMVEVNIYEA
GKHFMKGQPVSDARVYAASITRPLAKGEVSGLTEEFRHARNGTKWKTHPSAEIPVKAALI
PWMALHLPWHQEGRRLKILSVSLALLAFLAMVYYGGVKREL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgactcagtgctggaagatattgaagacattgtgtcagcacaagat
ttgaagccccatgattggcgatatgtaagaaagaatgtttttcccaaagtgcgaaagcgc
agttggaagcaaggaactcagacagatgatgatcctccatgtgacagtgtgattcctggt
attcagaagatctggattcgtacgtggggatgttctcacaataattcagatggtgaatat
atggcgggacagctagctgcatatggatacaaaattacagataactctgctgaagcagat
ttatggttgctgaacagctgtacagtaaaaaatccagctgaagaccacttcagaaactca
atcaagaaagcccaagaggcgaacaagaaagtggttctagcaggctgtgttccacaggcc
caacctcgtcaggattacctcaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgcttggtcagaaa
aagaacaatggaaaacgtttggggggagcacgactggatttgccaaagatcaggaagaat
ccacttatagaaatcatttccatcaacacagggtgtctcaatgcatgtacttactgcaaa
accaagcatgccagaggagatctagcaagctatcctattgaagaactagtggatagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccctacacttctgtggaagctggtcgaagctatt
cctgagggagctatgctgaggcttggcatgacaaatcctccctatattttagagcatctg
gaggaaatggcaaagattctcaatcatcccagagtgtatgcttttctgcacataccagtc
cagtccgcttctgacagtgtgctcatggacatgaaaagagaatactgcgtggcagacttc
agacgagtagtggatttccttaaagaaaaagtgcctgggataacaattgctacagacatc
atctgtggttttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
cagtataagtttccaagcttatttattaatcaattttacccacgcccaggaactcctgct
gcaaaaatgcatcaagttccagctgtggtgaaaaaacaaagaacaaaggatctgtcccag
ctgtttcattcatacaatccatatgatcataaggttggagaaaggcagagggttctggtg
acagaagaatcctttgattccaactactatgttgctcacaatccattctatgagcaggtt
ctggtgccaaaggatcctatgttaatgggtaaaatggtagaagtgaatatttatgaagct
gggaaacattttatgaaggggcagcctgtgtcagatgccagagtttatgctgcatccatc
acgagaccattagcaaaaggagaagtttctggtttaacagaggagttcaggcatgcacgg
aatggcacaaagtggaaaacacatccgtctgctgagatcccagtgaaagcagcactcatc
ccctggatggctttgcatctcccatggcaccaagaaggaagaagactgaagatactgtct
gtcagcctggctctactggcatttcttgctatggtttactatggaggagttaaaagagaa
ctgtga
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