Tympanuchus pallidicinctus (lesser prairie-chicken): 128089575
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Entry
128089575 CDS
T08967
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai00310
Lysine degradation
tpai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128089575 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpai03000
]
128089575 (PRDM6)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128089575 (PRDM6)
Enzymes [BR:
tpai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
128089575 (PRDM6)
Transcription factors [BR:
tpai03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128089575 (PRDM6)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128089575 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
128089575
NCBI-ProteinID:
XP_052557092
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSGQLKSSGALAQLQPPERAEPPADSLRQRPA
SLSSASSSSSTPSSSSASSCVAAAAASLAGLTALPVTQLPVFAPLQSSEPTAGGAPAPLQ
GKDLCGAGGGSKCGERASARFRCSAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADN
RNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAA
QRIQQGTWIGPFQGVLLLPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRY
IRCARHCGEQNLTVVQYRSNIFYRACVDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENL
NVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESGFNQ
ISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGH
CSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERS
FTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgaccccggcggctccgcgttcctgaaggtggatcctgcctatctg
cagcactggcagcagctcttcccgcagagcggccagctcaagagcagcggggccctcgcc
cagctccagccgcccgagagagccgagcccccggctgacagcctccgccagcgcccggcc
tcgctctcctctgcttcttcgtcctcgtctactccgtcttcctcatccgcctcgtcctgc
gtcgccgcggcggccgcgtccctggccggcctgaccgccctgccggtcacccagctgccc
gtcttcgccccgctacagagctccgagcccacggccgggggagcgcccgctcccctgcag
ggcaaggacttgtgcggggccggcggcggcagcaaatgcggtgagcgcgcttccgcccgc
ttccgctgctcggccgaggagctggactactacctgtacgggcagcagcgcatggagatc
atccccctgaaccagcacaccagcgaccccaacaaccgatgcgacatgtgtgccgacaac
cgcaacggcgagtgccccatgcatggcccgctgcactccttgcggcgcttggtgggcaca
agcagcgcggccgcagccgccccgccgcccgagatccctgaatggctgcgggaccttccg
cgtgaggtctgcctctgcaccagcaccgtgcctggcctggcctacggcatctgcgctgcg
cagcgcatccagcagggcacctggatcgggcccttccagggcgtcctgctgctgccggag
aaggtccaagcgggagccgtcaggaacactcagcacctctgggaaatatatgaccaagat
gggacattgcagcactttattgatggtggagaacccagtaagtcaagctggatgaggtac
atccgatgtgcgaggcactgcggggaacagaacttaactgtggttcagtacagatcaaat
atattctaccgggcttgtgtagatatccctcgtggcacagaactgttggtgtggtacaat
gacagctacacatctttctttggaatccctctccagtgcattgcacaagatgaaaatttg
aatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacagccatttaat
aaaagtagcaaactatcccctgccactccacagcgatctgtagtatttccacagactccg
tgcagcagaaatttttctctcctggataagtctgggtccatcgagtcaggatttaaccag
atcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaactaaattct
gagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttcacccagcgg
atcctcttacagatgcatgtgtgtacgcagaaccccgacaggccctaccagtgtggtcac
tgctcccagtccttctcccagccctcggagctgaggaaccacgtcgtcacacactccagt
gacagacctttcaagtgcggttactgcggccgagcctttgctggtgctacaacgctcaac
aatcacatccggacgcacactggggaaaagcccttcaagtgcgagaggtgtgagaggagc
ttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaata
acagagagcacagaatcaattgaagtggattaa
DBGET
integrated database retrieval system
