Thrips palmi (melon thrips): 117646026
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Entry
117646026 CDS
T08251
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117646026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpal03021
]
117646026
Enzymes [BR:
tpal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117646026
Transcription machinery [BR:
tpal03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117646026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
117646026
NCBI-ProteinID:
XP_034242547
UniProt:
A0A6P8Z6Z1
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MELSMGDSSARRVLDPRNVTFSVFTSDEIRKISVLKIVTPMTLNPLGHPVTGGLYDGAMG
PMLETSEPCKTCMKNIQSCPGHIGHIELPVPVTNPIFHKPVAVFIRMACLNCYRFQLPPA
VKWQIYAQLQLADAGFITEALEVENNCSFSDEKWPSAELEESSCKAKIIDYVLSVIKSSP
RSETDQNSANTKAAETVRNATLATLFRGSTTDKKCLFCKARLVKLTFFRDRLNVKVQVAP
KHQGEDTLNPNNSMVPNTSAVDLNATSSAVSKGQMQSLNPKELRDHLRGLWNNEKQFMAE
VMPILKDRDLEYPTDLFFFDVIPVPPPNVRPVNMVNGMPCDHPQTAMYKKLFTDSMVMWN
VIQLVQDGSIDKLSKEGKLLVQGVTGSSPFEKLHCAWEVLQTSTDQLLDTSSLNSKVRAQ
GLKQVLEKKEGVIRMHMMGKRVNFAARSVITPDPNLNVDEIGFPEAFALKLTYPVPVTPW
NVRELRQLVLNGPDVHPGAVYVEDENGRRARLKSDDPLQRETIAKQLLKPGDVAKNFTGG
TKKVHRHLVNGDILLLNRQPTLHRPSIMAHKARILKGEKTLRMHYSNCKSYNADFDGDEM
NAHFPQSELARSEAYNLVNVCHQYLVPKDGTPLGGLIQDHMVSGVWLSVRGKFFSREDYL
QLVYQAVGDMPGNIQLLRPAILKPLPLWSGKQVISTVIINTIPSRKSPINLTATAKIRAN
LWVKEKPRPWKAGGTPFGSSNTMSEAEVVIRQGELLCGVLDKTHYGATPYGLVHCMYELY
GGECSSKLLSAFSKLFMAFLQLMQGFTLGVEDILVMEKADKRRSDIIQECRKMGDSAAAA
ALGLPPDSPSDLLTEKMEEAYCDNKRNFRGEIDSQFKSLLNPYTDDINKTCLPTGLIQKF
PQNNLQLMVQSGAKGSTVNTMQISGLLGQIELEGKRPPLMISGRSLPSFAPYDRQPRAGG
FIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCVVKSLEGLSIHYDMTVRD
SDGSVVQFAYGEDGMDINKVQFLKPDQMSFLEDNHKVLYDKKLLKSLTDEESAKEISKQK
KRVKKWKKVSNNDGQRKSTFLNYTVGMKDTFNSKKLSSKTGRKKGLEQLIDVFRETPESN
PEMKQYVVNDKVPDPVSSTHFLHSHFGAVVERLDDMIDNYIKSRNGAHSTVIEDSQFRDM
LYLKAMCSLAPAGDPVGLLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLKEILMTA
SKNISTPSMEIPFQRDVTDLQKEAENLKGKLSRVTVADILEYVEVTESLVLSPVRAHQYV
MKMHFLPYEYYKQMYQVTPDSVLKHIERNFLAAIEFHIKKLISSAGKTTSIQEQVRKSMK
SGIENKKEAEEDDVAVEAPKADAGEGHESSDEEARDEDDDATAAKQHTKHQDTAAYSDES
GDDNSDNESEALIKQEEAVHEANEGDDVSFLNNYAHIDDYSYDKKKKEWCVIKISIALPC
KKLNLSTLVKEVSRLSAISEVRGLKKAFLLNNPREGIVLKTDGLNIIEMFKYSDLLDINK
LYSNDVHAIAGIYGIEAAVRVVVKEIQDVFKVYGITVDARHLMLIADFMTFSGVFLPMSR
TGLDNNPSALQKMSFEAPVGFLKKSLWLGKTDSLNSPSSRICVGRPCKSGTGAFQLRHQL
LIK
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggagctttcaatgggtgacagcagtgcgaggcgtgtcctcgaccccaggaacgttact
ttctctgtgttcacatcagatgaaatccgcaagatcagtgttttgaagattgtgacccct
atgactctcaaccctttgggacatcctgtcactggtggtctttatgatggtgctatgggg
cccatgttggaaaccagtgagccttgcaaaacctgcatgaagaatattcaaagctgtcct
gggcacatcggacacatcgaactgcctgttcctgtgaccaacccaatcttccacaaacca
gtcgctgttttcataagaatggcttgtttgaattgctaccgatttcagctgccacctgca
gttaaatggcaaatctatgctcaacttcaactagccgatgctggattcattacagaagcc
ttagaagttgaaaataactgttcattttcggatgagaagtggccttccgctgaattagaa
gaatcttcttgtaaggccaagataatagattatgttctttctgtcatcaaaagtagccca
cgttctgaaacggaccaaaactcagccaataccaaagctgctgaaacagttcggaatgct
acattagccactttattccgaggttccactactgacaagaaatgccttttctgcaaagca
cggttggtgaagttaacatttttcagggatcgcttgaatgtgaaggttcaagtagcacca
aagcatcagggtgaggacactctgaaccctaataattcaatggtcccaaatacgtccgct
gtagatttgaatgcaacatcatctgctgtctccaaaggccaaatgcagtctcttaacccc
aaagaattaagggatcatttgcgaggtctatggaacaatgagaagcagtttatggctgaa
gtgatgcccatcctgaaagatagagacctggagtaccctacagatctcttcttctttgat
gttataccggtacctccacccaacgtgcgccctgtaaatatggtcaatggaatgccttgt
gatcatcctcagactgccatgtacaagaaacttttcacagattcaatggttatgtggaat
gttattcaactggttcaagatggctcaattgacaaactctccaaagaaggcaagttactt
gttcaaggagttacgggtagcagtccatttgaaaagctgcattgtgcctgggaggtactg
cagacaagtacggatcagttgctagacactagctccctgaatagcaaagttagagcgcaa
ggcctgaaacaagttctagaaaaaaaggaaggtgtaatccgaatgcacatgatgggtaag
cgtgttaattttgcggctcgctctgtcattactcctgatcccaatctaaatgtagatgaa
attggatttccggaagcttttgccttgaaattgacatatcctgtgccagtcaccccttgg
aatgtgagggaactaaggcaactggttttgaatggtcctgatgttcaccctggtgctgtg
tatgtagaagatgaaaatggacgccgtgcacgtttgaagagtgatgatcccttgcagagg
gagaccatagccaaacagcttctgaaaccaggagatgttgccaagaattttactggaggc
actaagaaagtgcaccgccatttggtgaatggtgatattctattgctcaacagacagcct
actctccatcggcccagtataatggctcacaaagcacgtattctgaagggagagaaaact
cttcgaatgcattattccaactgcaaatcctacaatgctgattttgatggagatgaaatg
aatgctcactttccacagagtgagctggcaaggagtgaagcttataacttagtgaacgtg
tgtcaccagtatcttgtccccaaggatggcactccattgggtggattgattcaggatcat
atggtttcaggtgtgtggctttcagtgagaggaaagttcttttcacgtgaagattattta
cagctggtatatcaggccgttggtgacatgcctggaaacattcaacttctccgccctgct
atcctgaagcctctcccattgtggtcaggaaagcaagttatctctacagtaattattaac
accattcctagcagaaaatcaccgatcaacttgactgctactgccaaaatcagagcaaat
ttgtgggttaaggaaaaaccccgtccgtggaaagcaggaggcacaccatttggctcttca
aacacaatgtcagaagctgaagttgttatcagacaaggcgagttactttgtggagttctt
gacaaaacccattacggtgccactccctatggtttagtgcattgcatgtatgaactctat
ggtggagaatgttcaagtaaattgctcagtgccttctcaaagttgtttatggcattcctt
cagttgatgcaaggattcaccttaggtgttgaagatatcttggtaatggaaaaagctgac
aagcgtcgttctgatattatccaagaatgccggaaaatgggggactctgctgctgctgct
gcgcttggacttcctccagacagcccttcagatcttctaactgaaaagatggaagaggca
tactgtgataacaagagaaactttagaggagagattgacagtcaatttaagagtttgctc
aacccatatactgatgatatcaacaagacatgccttccaactggcttaatacagaaattc
cctcaaaataatctgcaacttatggttcaatctggagctaaaggttccactgtaaacacc
atgcaaatttcaggattactgggccagattgaattagaaggcaagcgccctccacttatg
atatcaggacgctctctgcctagttttgctccttatgacaggcaaccaagagctggtggt
ttcattgatggacggttcatgacaggaattcaaccacaggagttctttttccattgtatg
gcaggacgtgaaggattgattgatactgctgtgaagacgagtcgtagcggttacttacaa
aggtgtgtcgttaaaagtttggaaggtctcagcatacactacgatatgactgtgagggac
agtgatggaagtgttgtgcagtttgcctatggagaagatggcatggacataaataaggtc
cagtttttgaaacctgaccagatgtccttcttggaagataatcataaagtattgtatgat
aagaaattgctgaaatcacttacagatgaagaaagtgctaaagaaatttcaaagcagaag
aaaagagtcaagaagtggaaaaaagttagtaacaatgatggacaaagaaaaagtacattc
ctcaactacacagttggaatgaaagatacattcaactccaagaagctatccagcaaaacc
ggaagaaagaaaggcttggaacagctaattgatgtcttcagagagactccagagtctaat
ccagaaatgaaacagtatgttgtcaatgataaagttcctgatccagtgtcttcaactcac
tttttacattcacattttggtgctgtggttgaacgtttagatgacatgatagataattat
atcaaaagtagaaatggagcgcacagcactgtcattgaggattcacaattcagggacatg
ttgtatcttaaggcaatgtgttccctcgcccctgctggggatcctgtgggcttgttggct
gctcaatctgttggggaaccctcaactcagatgacattaaataccttccactttgctggt
cgaggagaaatgaatgtcactcttggtattccacgtctgaaagaaattctcatgacagca
tccaaaaacataagcactccatcaatggaaataccatttcaaagagatgtcacagacctc
caaaaagaagctgaaaacctaaaaggtaaactctctagagtcactgtagctgatattctg
gaatatgttgaagtgacagaatctttggtcctatctcctgtacgggctcatcagtatgtc
atgaagatgcacttccttccatatgaatactacaaacaaatgtatcaggtaactcctgat
tctgtgttgaagcatatcgagaggaatttccttgctgccatagaattccacatcaagaag
cttatttcatctgccggtaaaactacatcaatccaggagcaggtcagaaaatctatgaag
tctgggatagaaaacaagaaagaggctgaggaagatgacgtcgctgtggaggctcctaaa
gctgatgctggtgagggtcatgaaagttctgacgaagaggctcgagatgaagatgatgat
gctacagcagccaagcaacacacaaaacatcaggatactgcagcctacagtgatgaatca
ggagacgataattctgacaatgaatctgaagccctcataaaacaagaagaagccgttcat
gaagctaatgaaggagatgatgtaagtttcctcaataattatgcccatattgatgactac
tcttatgacaagaaaaagaaagaatggtgtgtcatcaaaattagtattgcgctcccatgc
aagaagctaaatctttctacgcttgtgaaggaggtatctcgcttgtcagcaattagtgaa
gttcgtggtctgaagaaagcatttctccttaataaccctcgagagggcatagtgctgaag
actgatggtctcaacataatagaaatgttcaaatactcagacctgcttgatataaacaaa
ctgtactccaatgatgttcatgccattgcaggaatctatggcattgaggctgcagttaga
gtagttgttaaagaaattcaggatgtttttaaagtctatggtattacagttgatgctcgc
catctcatgttaattgctgattttatgactttctctggtgtatttttacctatgagccga
actgggcttgacaacaacccatctgctttgcaaaaaatgtcctttgaagctcccgttggt
ttcttaaagaagtcattgtggctaggaaagactgacagtcttaattcaccatctagtcgc
atttgtgtgggcagaccgtgcaagagtggaacaggagcttttcagctccgtcatcaatta
ctcatcaagtag
DBGET
integrated database retrieval system
