Thermus parvatiensis: AV541_04890
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Entry
AV541_04890 CDS
T04274
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tpar
Thermus parvatiensis
Brite
KEGG Orthology (KO) [BR:
tpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpar03009
]
AV541_04890 (rimO)
Enzymes [BR:
tpar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AV541_04890 (rimO)
Ribosome biogenesis [BR:
tpar03009
]
Prokaryotic type
ribosomal protein modification factors
AV541_04890 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AMA75513
UniProt:
A0A0X8D904
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All DBs
Position
870859..872163
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AA seq
434 aa
AA seq
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MAKIGFVSLGCPKALVDSEQILSRLKALGYETSPSYEEAELVIVNTCGFINEAVEESLEA
IGEALKENGKVVVTGCLGARPEKIRERHPQVLAVTGPGEVERVLEAVQEVLPAPRDPFLD
LIPPQVKLTPRHYAYVKLSEGCDHRCSFCIIPKLRGRLRSRDAADVLAEAARLVATGTKE
LLLVAQDLSAYGVDLGHRESFWGDRLVRAELKDLLTHMAELGAWIRLHYVYPYPHVKDLL
PLMAEGKVLPYLDVPLQHASERILRRMRRPGGYHSHLKTLKAWREVVPHLAVRSTFIVGF
PGETEEDFQILLDFLEEAELDRVGVFTYSPVEGAEANRLEGHVPEEVKEERKARLLELQA
RVSLRKNQRFVGKTLEVLVDELPEPGLAVGRTYRDAPGIDGVVYVETDGTVRVGERIPVR
IIRADTYDLHGVQV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcggttttgtcagcttgggctgccccaaagccctggtggactcggagcag
atcctttcccggctcaaggccctggggtacgagacgagccccagctacgaggaggcggag
ctcgtcatcgtcaacacctgcggcttcatcaacgaggcggtggaggagagcctcgaggcc
atcggcgaggccctcaaggaaaacggcaaggtggtggtcacgggctgcctgggggcgcgc
cccgagaagatccgggagcgccacccccaggtgctcgccgtcacgggtccgggggaggtg
gaaagggttctggaggcggtgcaggaggtgctccccgcccccagggaccccttcttagac
ctcatccctccccaggtcaagctcaccccgaggcactacgcctacgtgaagctttccgag
gggtgcgaccaccgctgtagcttctgcatcatccccaagctgcggggaaggctccgctcc
cgcgacgccgccgacgtcctcgccgaggcggcgaggctcgtggccacggggacgaaggag
ctcctcctcgtggcccaggacctctcggcctacggggtggacctggggcaccgagaaagc
ttttggggcgatcggctggtgcgggcggagcttaaggacctcctcacccacatggccgag
ctcggggcctggatccggctccactacgtctacccctacccccacgtcaaggacctcctt
ccccttatggccgaggggaaggtcctgccctacctggacgtgcccctccagcacgcttcc
gaaaggatcctccgtcgcatgcgccgccccggggggtaccatagccacctcaagaccctc
aaggcctggcgggaggtggtgccccacctggcggtccgctccaccttcatcgtgggcttc
cccggggagacggaggaggacttccagatcctcctggacttcctggaggaggcggagctg
gaccgggtgggggtgttcacttactcccccgtggagggggcggaggcgaaccgcctggaa
ggccacgttcccgaggaggtgaaggaggagcgcaaggcgaggcttttggagctgcaggcc
cgggtgagcctcaggaagaaccagcgtttcgtgggcaagaccctggaggtcctggtagac
gagcttcccgagcccggcctcgccgtaggccgcacctaccgggacgccccgggcatagac
ggggtggtctacgtggagacggacggcaccgtgcgggtaggggagaggatccccgtgcgc
atcattcgggccgacacctacgacctccacggggtccaggtttag
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