KEGG   Thermofilum pendens: Tpen_0290
Entry
Tpen_0290         CDS       T00446                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tpe  Thermofilum pendens
Pathway
tpe03020  RNA polymerase
tpe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tpen_0290
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tpen_0290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpe03021]
    Tpen_0290
   03400 DNA repair and recombination proteins [BR:tpe03400]
    Tpen_0290
Transcription machinery [BR:tpe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Tpen_0290
  RNA polymerase III system
   RNA polymerase III
     Tpen_0290
  RNA polymerase I system
   RNA polymerase I
     Tpen_0290
DNA repair and recombination proteins [BR:tpe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Tpen_0290
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ABL77700
UniProt: A1RWX0
LinkDB
Position
complement(258309..258554)
AA seq 81 aa
MKIGPPWLTRFERARIIGIRALQISLGAPVLIQVSEELSDPITIAEKELELGLLPIIVVR
WTPEGKIQEIPIKYLKLRPQL
NT seq 246 nt   +upstreamnt  +downstreamnt
gtgaaaataggccctccatggctcacgaggtttgaaagagctagaataatagggattcga
gctctccaaatttctctgggtgcaccggttctaatacaggtcagcgaggagctctctgat
cccataacaatagccgagaaagagctagagctaggcctgcttccgataatcgttgtcagg
tggacgccggaagggaagatccaagagataccgataaagtatttgaagctcagaccacag
ctctaa

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