Thermofilum pendens: Tpen_0616
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Entry
Tpen_0616 CDS
T00446
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpe03016
]
Tpen_0616
Enzymes [BR:
tpe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Tpen_0616
Transfer RNA biogenesis [BR:
tpe03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Tpen_0616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ABL78020
UniProt:
A1RXU0
LinkDB
All DBs
Position
complement(572407..573693)
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AA seq
428 aa
AA seq
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MARVYIETFGCWLNKGESNIMATLLKRRGHKVVESIENADVVILNTCAVRGDTETKIFRR
LRELEELRQKRGFRLVVSGCLVNVRPKSILDVAPSASLVEPDAIEKIPEVVESEDKLLIV
RQYKASRNVLPDYSGGAVHVVPIESGCLGSCAFCIEWVTRGTGVKSYPIDVIIENVRAAV
SKGAREIFLTGQDVAAYGYDLGTNLYELVKRILEEVDGEYRVRLGMMEPMLLGRFLKNLL
ELFRDERLYRYFHIPAQSGDDKVLRLMRRKYTVEEYKGIVNTIRGSGWKFSIVTDIIVGF
PGEGEAEFQNTLKFLREVMFDKVHVARYTFRPFTEGYVMSGVPEPVKKQRSRLASRVALE
VAYEINRSYVGEEREVVVEGTSIRGDLVGRTIEYKPVVIKDQEARVGEIVRVKIVDATPV
SLIGKVLA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagtctacatcgagacctttggctgctggctcaataaaggagaaagcaacata
atggcaacactgctcaagaggagaggacacaaggtagtagaaagtatcgagaacgcagac
gtagtcatactcaatacctgtgcagttagaggagacaccgagacgaaaattttcaggagg
ctaagagagctggaagaattaaggcaaaagagggggtttaggctcgtagtcagcgggtgc
ctcgtcaacgtacgccctaagagcatacttgacgtcgcgcccagcgcttcactagtggag
cccgacgctatcgaaaaaatacccgaggttgtcgaatccgaggacaagcttctcatcgtt
cggcagtataaagcttcccgaaacgtgcttccagactacagcgggggggccgtccacgtc
gtgccaatagagagcggatgcctcggctcctgtgctttctgcatcgaatgggttacacgg
ggtaccggcgttaagagctacccgatcgatgtgataattgagaacgtgagggccgctgtc
tctaagggtgctagggaaatcttcctaacaggccaggacgtagcagcctacggctacgac
ttggggacaaacctctacgagctcgtgaagaggatacttgaggaggtggacggagagtac
agggttaggctcggcatgatggagcccatgctcttggggaggtttctcaaaaatctcttg
gagcttttcagagacgagaggctttacaggtacttccatatcccagcgcagtctggagac
gacaaagtgctgaggctcatgcggcgcaaatacacagtagaggagtataaggggatcgtg
aacacgatcagaggctcagggtggaagttcagcatagtcacggacataatagtggggttc
ccgggagagggtgaggcggagtttcaaaataccctaaagttcctaagggaagtaatgttc
gacaaggtgcacgttgctcgctacacgtttaggccctttacggaggggtacgtgatgtcg
ggtgtacctgagcccgtgaagaagcagaggagcaggcttgcctcgagggtcgccttagaa
gtcgcgtacgagataaacaggagctacgtgggagaagagagggaagttgtagtggagggc
acctctatccgcggagaccttgttggaagaacgatagagtataagcctgtcgttattaag
gatcaagaagcaagggtcggggagatagttagagtgaagatagtcgacgccacgccggtc
agcctaataggcaaagtgcttgcttag
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