Tetrapisispora phaffii: TPHA_0A03070 Help Entry TPHA_0A03070      CDS       T02235                                  Symbol TPHA0A03070 Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism tpf  Tetrapisispora phaffii Pathway tpf03020   RNA polymerase tpf03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tpf00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     TPHA_0A03070 (TPHA0A03070)   09124 Replication and repair    03420 Nucleotide excision repair     TPHA_0A03070 (TPHA0A03070)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tpf03021]     TPHA_0A03070 (TPHA0A03070)    03400 DNA repair and recombination proteins [BR:tpf03400]     TPHA_0A03070 (TPHA0A03070) Enzymes [BR:tpf01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      TPHA_0A03070 (TPHA0A03070) Transcription machinery [BR:tpf03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      TPHA_0A03070 (TPHA0A03070) DNA repair and recombination proteins [BR:tpf03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       TPHA_0A03070 (TPHA0A03070) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R DUF1887 Motif Other DBs NCBI-GeneID:  11532492 NCBI-ProteinID:  XP_003683819 UniProt:  G8BNA7 LinkDB All DBs Position 1:complement(671766..676925) Genome browser AA seq 1719 aa AA seqDB search MVGQQYSSAPLRTVKEVQFGLFSPEEVRSISVAKIKFPETMDETQTRAKIGGLNDPRLGS IDRNLKCQTCQEGMNECPGHFGHIDLAKPVFHIGFISKIKKVCECICMHCGKLLLDENNE QMRQVMSIKDSKKRFNAIWTLCKTKTVCETDVPSEDDPTQLISRGGCGNAQPTIRKDGLK LVGSWKKDKATNDGDEPEQRVLNTEEILNIFKHISVHDSNTLGFNEQFARPDWMILTVLP VPPPPVRPSISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHI ATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLE LDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRDNGDRIDLRYSKR AGDIQLQYGWKVERHIMDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLNLSVTSPYNA DFDGDEMNLHVPQSEETRAELSQLCSVPLQIVSPQSNKPCMGIVQDTLCGIRKLTLRDCF IELDQLLNMLYWVPDWDGIIPTPAIIKPVPLWSGKQILSIAIPKGIHLQRFDEGTTMLSP KDNGMLIIDGQIIFGVVDKKTVGSSNGGLIHVVTREKGPQICAKMFGNIQKVVNFWFLHN GFSTGIGDTIADGGTMKEITETIADAKRKVEEVTKEAQANLLTAKHGMTLRESFEDNVVR FLNEARDKAGRLAEVNLNDLNNVKQMVSAGSKGSFINIAQMSACVGQQSVEGKRIAFGFV DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRR LVKALEDIMVHYDSTTRNSLGNVIQFVYGEDGIDAGHIEKQSIDTIGGSDAAFEKRYRID LMSPNHALDPSLLESGLEITGDVKLQSILDTEYKQLVDDRRFLRNVFIDGEPNWHLPVNI RRIIQNAQQTFRIDHTKPSDLTINEVIRDVARLQENLLVLRGKGKIIEEAQNDAITLFCC LVRSRLAVRRVLQEYRLTKQAFQWVLNNIESQFLRSIVHPGEMVGVLAAQSIGEPATQMT LNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSSTVYLDPEYATDQEKAKIIRSAIEH TTLKSVTVASEIYYDPDPTTTVIAEDEEIIQLHYSLMDSETEKNIDNQSPWLLRLELDRA AMNDKDLTMVQVGEKIKETFRNDLSVIWSEDNADKLIIRCRVVRPKSLDAETEAEEDHML KKIENTMLESITLRGVEDIERVVMMKYDRKMPSETGEYQKVPEWVLETDGVNLMEVMTVP GVDGSRIYTNSFIDITEVLGIEAGRAALYREVYNVIASDGSYVNYRHMALLVDVMTTQGG LTSVTRHGFNRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGA FDVMIDEESLVKYMPEQKVTEIEEGQEGGATPYSSESGLINADIDIKDDLMFSPLVDSGL SDSMNGGFTAYGGADYGGATSPFSAYRESPSSPGFGGVSSPGFSPTSPGYSPTSPSYSPT SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS PSYSPTSPSYSPTSPSYNPGNPSYSPSSPKKDEEEKEDN NT seq 5160 nt NT seq  +upstreamnt  +downstreamnt atggtaggtcaacaatattcaagtgctcctttacgtacagttaaagaagtccaattcggt cttttttcaccagaagaagttcgttccattagtgtagctaagatcaaatttccagaaact atggatgaaacacagacaagagctaaaattggtggtttgaatgacccaagattaggttct attgatcgtaatcttaagtgtcaaacatgtcaagaaggtatgaatgaatgtcccggtcat tttggtcatatcgatttagcaaagcctgtgttccacattggtttcatttctaaaattaaa aaagtttgtgaatgtatctgtatgcactgtggtaaactactgctggacgaaaataatgag caaatgagacaagttatgagtattaaagattcaaaaaagagattcaatgctatttggact ctttgtaaaacaaaaactgtctgtgaaactgatgttccatctgaggacgatccaacccaa ttaatttctagaggtggttgtggtaacgctcaacctactatcagaaaagatggtttaaag ttggttggtagttggaagaaggataaagccaccaatgatggtgatgaaccagaacagaga gttttaaatacagaagagattctaaatatctttaaacatatctcagtccatgattcaaat actttgggtttcaatgaacaatttgcccgtcctgattggatgattttaaccgttttacct gtcccaccaccaccagttcgtccttccatttcttttaatgaatctcaaagaggtgaagat gatttaacatttaaattagcagatatcttgaaagcaaatattagtttagaaactttagag cataatggtgcccctcatcatgctatcgaagaagcagaaagtttattacaatttcacatt gctacatatatggataacgatattgcaggtcaacctcaagctttacaaaaatctggtcgt ccagttaaatctatccgtgcgcgtttaaagggtaaggaaggtcgtattagaggtaactta atgggtaagcgtgttgatttttctgcaagaactgttatttccggtgaccctaacttagaa ttagatcaagttggtgttccaaaatctattgctaaaaccttaacatatcccgaggttgtt acaccatataatatcgaccgtttgacacaattagtacgtaacggccctaacgaacatcct ggtgccaagtatgttatccgtgacaatggtgaccgtattgatttaagatatagtaaacgt gctggtgacattcagctacagtatggttggaaggttgaacgtcatattatggataacgat cctgttctgttcaatcgtcaaccatctttacataaaatgtctatgatggctcacagggtc aaagttatgccatattctacttttaggttaaatttatctgtcacttcgccttataatgca gatttcgatggtgatgaaatgaatttacatgttcctcaatctgaggagacaagagcagag ttatcacaattatgttctgttcctttacaaattgtttctccacaatcgaataaaccatgt atgggtatcgtccaagatactttatgtggtattagaaaattgactttaagagattgtttt attgaattagaccaattattaaacatgttatattgggttccggactgggatggtattatt ccaaccccagctatcataaaaccagtacctttatggtctggtaaacaaatcttgtctatt gccattccaaaaggtattcatttacaaagatttgatgaaggtacaactatgttatcacca aaagataatggtatgttaattattgatggtcaaataatcttcggtgtggtagacaaaaaa acagtcggatcttctaacggtggtttaatccatgttgttacaagagaaaagggtcctcaa atctgtgccaaaatgtttggtaatattcaaaaagtagtcaacttctggttcttacataac ggtttctccaccggtatcggtgatacaattgccgacggtggaactatgaaagagattact gaaactattgctgatgctaagagaaaagtggaagaagtcaccaaagaagcccaagcaaac ttattaacagcaaagcatggtatgacgttacgtgaatcctttgaagataatgttgttcgt ttcttaaatgaagcgagagataaagctggtcgtttagctgaagttaatttaaatgactta aataatgtcaaacaaatggtaagtgctggttcaaaaggttctttcattaatattgcacaa atgtccgcttgtgttggacaacaatctgttgaaggtaaacgtattgcatttgggttcgtt gatcgtaccttgcctcatttttctaaagatgattattctccagaatctaagggttttgta gaaaattcttatttaagaggtttaactccacaagaatttttcttccatgctatgggtggt cgtgaaggtttaatcgatactgctgttaaaactgcagagactggttatattcaacgtcgt ttagtgaaggctctagaggatattatggttcattatgatagcaccactagaaattctctt ggtaatgtaattcaatttgtttatggtgaggatggtattgatgctggtcatatcgaaaag caatctatagatacaatcggtggttcggatgcagcattcgagaagagatatagaatcgat ttaatgagtcctaatcacgctctagatccgtccttactggaatctggtctagaaataact ggcgatgttaaactacaatccattttggatacagagtacaaacaattagttgacgatcgt cgtttcttaagaaatgtgttcatcgatggtgagccaaactggcacttaccagttaatata aggcgtatcatccaaaatgctcaacagactttcagaatcgatcatacaaaaccttctgat ttaactatcaatgaagtaattcgtgatgttgcacgcttgcaagaaaatttattggtttta agaggtaaaggaaaaataatagaagaagcacaaaatgatgctattacattattctgctgc ttagttcgttcacgtttagcagtacgtagagtgttacaagaatatagactaacaaaacaa gccttccaatgggttttaaataatatcgaatctcaattcctacgttcaattgttcaccca ggtgaaatggtcggtgtcttagcggcgcaatctattggtgaacctgccacacaaatgaca ttaaacactttccattttgctggtgtggcatcaaagaaagtcacttcaggtgttcctcgt ttaaaggaaattctaaatgttgccaaaaatatgaaaacaccatcatctactgtttactta gatccagagtatgctactgaccaagaaaaggctaagattattagatcagctatcgaacat acaacattaaagagtgttactgttgcttctgaaatttattatgatcctgatcctaccacc acggtcattgccgaagatgaagaaattattcaattacattactctttaatggattcagaa acggaaaagaatatcgataaccaatcgccgtggttgttacgtctagaactagatcgtgct gctatgaacgataaagatttaactatggtacaagttggtgaaaagatcaaagaaacattt agaaatgatttatctgtcatctggtccgaagataatgctgataagttaatcattcgttgt cgtgttgttcgtccaaagtcattagatgccgagaccgaagcagaagaagatcatatgtta aagaagattgaaaataccatgttagaaagtattactttacgtggtgtggaagatattgag cgtgtggttatgatgaaatatgatagaaagatgccaagtgaaactggtgaataccagaag gttccagaatgggttctagaaaccgatggtgttaatttaatggaagttatgacagttcca ggtgtggatggttcaagaatatatacaaactctttcattgacattactgaagttttgggt attgaagctggtcgtgctgcattatacagagaagtctataacgtcatcgcatccgatggt tcttatgttaattatcgtcatatggctttgttagttgatgtaatgaccacccaaggtggt ttaacatcagtcactcgtcatggtttcaatagatctaacacgggcgctttaatgagatgt tcttttgaagaaaccgtggaaattttatttgaagccggtgcttctgcagaattagatgac tgtcgtggtgtgtctgaaaatgttattttgggtcaaatggctccaattggtacgggtgca tttgatgtcatgattgatgaggaatcactagttaagtacatgccagaacaaaaagttact gaaattgaggaaggtcaagaaggtggtgctactccatactcgagcgaatctggtttaatt aacgccgacattgacatcaaggacgacttaatgttctcaccgttagttgactccggttta tccgattctatgaacggaggctttacagcatatggaggtgctgattatggtggagctact tcaccattcagtgcctacagagaatccccatcttcccctggttttggtggtgtatcttct ccaggattttctccaacttcacctggttactcaccaacttcgccaagttattccccaact tcgccaagttactccccaacttctccatcatattctccaacgtcaccaagttactcccca acttctccatcatattctccaacttcgccaagttactctccaacttcaccaagttattcc ccaacttcaccaagttactctccaacttcgccaagttactctccaacttcaccaagttac tctccaacttcaccaagttactctccaacatcaccatcatattctccaacttcgccaagt tactctccaacttcaccaagttattccccaacttcaccaagttactctccaacttcacca agttactctccaacttcaccatcatattctccaacttcgccaagttactccccaacatca ccatcatattctccaacttcgccaagttactccccaacatcaccaagctataatcctggt aatccttcttactctccaagctctccaaagaaggatgaagaagaaaaagaagataattaa

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