Tetrapisispora phaffii: TPHA_0B03010
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Entry
TPHA_0B03010 CDS
T02235
Symbol
TPHA0B03010
Name
(RefSeq) hypothetical protein
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03020
RNA polymerase
tpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TPHA_0B03010 (TPHA0B03010)
09124 Replication and repair
03420 Nucleotide excision repair
TPHA_0B03010 (TPHA0B03010)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0B03010 (TPHA0B03010)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0B03010 (TPHA0B03010)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
TPHA_0B03010 (TPHA0B03010)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TPHA_0B03010 (TPHA0B03010)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Spo16_C
Motif
Other DBs
NCBI-GeneID:
11535098
NCBI-ProteinID:
XP_003684407
UniProt:
G8BPP2
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All DBs
Position
2:686766..687374
Genome browser
AA seq
202 aa
AA seq
DB search
MNISTSNQTKIRRLKKVEEEENAATLQLGPEFQLQQINHQGEVEELIALNLSESRLLIKE
ALVERRKIFKRSQKGKQISEGLNSGEEDNEDKEFMQAETREKELDSLDLLLEQTTGGNNK
DLKNSMGYLTNFSRFRDQETVGAVIQLLRSTGLHPFEVAQLGSLACDTADEAKTLIPSLN
NKISDDELERILKELSNLETLY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttcaacatctaatcaaacaaaaataagaagactgaaaaaagtagaggaggaa
gaaaatgcagctactttacaactaggtccagagttccaattgcaacaaattaatcatcaa
ggtgaagttgaagaactaatagcgttgaatttgagtgagtctcgtttattgattaaagaa
gctcttgtggagcgtagaaaaatatttaaaagatcacaaaagggtaaacaaataagtgaa
ggtttgaatagtggagaagaagataatgaagataaagaattcatgcaggctgaaacacgt
gagaaggaattagattcattggatttattgctagaacaaactactggtggtaataataaa
gatttaaaaaactcaatgggatatttaacaaatttttcaagattcagagatcaagaaacc
gttggtgcagttatccaattattaagaagtacagggttacatccatttgaagttgctcaa
ctaggttctcttgcttgtgatacagctgatgaagcaaaaacattgattcctagtttaaac
aataaaatatcagacgatgaattagaaagaatcttaaaggaattatcaaacttggaaact
ctatactaa
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