Tetrapisispora phaffii: TPHA_0C04510
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Entry
TPHA_0C04510 CDS
T02235
Symbol
TPHA0C04510
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03020
RNA polymerase
tpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TPHA_0C04510 (TPHA0C04510)
09124 Replication and repair
03420 Nucleotide excision repair
TPHA_0C04510 (TPHA0C04510)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0C04510 (TPHA0C04510)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0C04510 (TPHA0C04510)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TPHA_0C04510 (TPHA0C04510)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TPHA_0C04510 (TPHA0C04510)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Plug
Motif
Other DBs
NCBI-GeneID:
11533638
NCBI-ProteinID:
XP_003685036
UniProt:
G8BQU0
LinkDB
All DBs
Position
3:complement(973590..974522)
Genome browser
AA seq
310 aa
AA seq
DB search
MSDEGPQVKIREATKDNVDFIVSNVDLAMANAFRRVMIAEIPTLAIDSVEVISNTTVLAD
EFIAHRLGLVPLQSADIEQLEYSRDCFCEDHCDKCSVVLTLQALGESESTTNVYSKDLVI
VSDLLGRNIGHPIIQDKEGNGVLICKLRKGQELKFTCIAKKGIAKEHAKWGPAAAIEFEY
DPWNKLKHTEYWYEQDAAKEWPQSKNCEYEDPPNEGSEFDYKAKADTFYMNVETIGTVTS
DQVIVRGIDILQKKVASILLALNRLDQDKVNYAGNNNVNNGEMDGEDITMNGTENDPYAS
GNNNSYDGAW
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaaggtccacaagtgaaaattagagaagctactaaggataatgttgatttc
attgtatctaatgtcgatttggcgatggccaacgcattccgtagagttatgatagctgaa
atccctaccctagctatcgattctgttgaagttattagtaatactacagtgttggcagat
gagtttattgctcatagattggggttggttcctctgcagagtgctgacatagagcaattg
gaatacagtcgtgattgtttctgtgaagatcattgtgacaaatgttctgttgttttaact
ttacaagcattgggtgaaagcgaaagtactactaacgtttactcgaaagatttagtgatt
gtatccgatctattgggtcgtaatataggacatccaatcatacaagacaaagaaggtaat
ggtgttctgatttgtaaattaaggaaaggtcaagaactaaaattcacatgtatagctaaa
aagggtattgctaaagagcatgccaaatggggccctgcagctgccattgaatttgaatat
gatccttggaataaattaaaacatacagaatattggtacgagcaagatgccgcaaaagaa
tggcctcaatctaaaaactgtgaatatgaagatcctcctaacgaaggtagtgaatttgat
tataaggccaaagccgatactttctacatgaatgttgaaaccatcggtacagtgacatct
gatcaagtcatagttagagggattgacattctacaaaagaaagttgcatcaatattatta
gcattaaatagattggaccaagataaagttaactatgctggaaacaacaacgtcaataat
ggtgaaatggacggagaagatattacaatgaatggaactgaaaatgatccgtatgcatcg
ggaaataataatagttacgatggtgcatggtaa
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integrated database retrieval system
