Tetrapisispora phaffii: TPHA_0D01350
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Entry
TPHA_0D01350 CDS
T02235
Symbol
TPHA0D01350
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TPHA_0D01350 (TPHA0D01350)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0D01350 (TPHA0D01350)
Enzymes [BR:
tpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
TPHA_0D01350 (TPHA0D01350)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
TPHA_0D01350 (TPHA0D01350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
PduV-EutP
Roc
MMR_HSR1
AAA_16
nSTAND3
AAA_7
AAA_24
Motif
Other DBs
NCBI-GeneID:
11534277
NCBI-ProteinID:
XP_003685210
UniProt:
G8BSF5
LinkDB
All DBs
Position
4:complement(279973..281322)
Genome browser
AA seq
449 aa
AA seq
DB search
MESLPGINDASSNQEVVNGDDEIHDLSLKKGDEWKIGVSSDNKLIVKIIHGIAEIFGTEL
ANNKDYVFQNFKFSIFAVEDVELQWRCMELVGTNLSVQENITAKYIYNLHFALEKLRAAS
FDGPKIMIVGNSNTGKTSLTRTLCSYAIKYKTYQPLFVNLNPAEGIFTVPGAISATPVSD
ILDPQSSRWGQSMTSGATELHSKQPLVKNFGLEYIRENRELYKVVISQLAEVAMNRMQND
ALVHRSGCIINTPPLEDLDDDLSELLVSFNQFKVNYIIYLGEETDENFSKIKKMFPESFL
ANILRIPKLSGIIPTDDIYKRSLQRSSIREYFYGTYNSVLSPYTIGVDFDDLTVWKPKNM
IEDQENMEQSSPSKYTSVEINASNLQHSLVSLTYADRKENESAVQKAAILGYGLVTEVNE
KRHKLRILLPVPGALPNKAMVLTSYRYLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttacctggtattaatgatgcttcaagtaatcaagaagttgttaatggtgac
gatgaaatccatgatctgtctttaaaaaagggtgacgaatggaaaattggcgttagttca
gataataagctgattgtaaaaattatacatgggattgctgagatttttggtactgaattg
gctaataataaagactatgtgttccagaattttaaattctccattttcgctgttgaagat
gttgaattgcaatggagatgcatggaattggtcggaactaatttaagtgttcaggaaaac
atcacagccaagtacatttataatttacattttgcattggaaaaattaagagccgctagt
tttgatggaccaaaaattatgatcgtaggtaattcaaatacaggtaaaacatccttaaca
aggacactatgctcgtatgctatcaaatataaaacgtaccaaccattgtttgtaaacttg
aatcctgcagaaggtatatttactgttccaggtgcgattagtgctactccagtatctgat
atattggacccacaatcttcaaggtggggtcaaagtatgaccagtggtgctactgaattg
catagcaaacagcctctggtgaaaaactttggtttggaatatattagagaaaatagagag
ctgtataaagttgtaatatcacaattggctgaagtagcgatgaacagaatgcaaaatgat
gcattggtccatagatctgggtgtataatcaatacaccacctttagaagatttggatgat
gatttgtcagagctgttggtttctttcaaccaattcaaagtcaactacataatatactta
ggtgaagagacagatgaaaactttagcaaaattaagaaaatgtttcctgaatcgttctta
gcaaatattttaagaattcctaaactgagtggtataataccgactgacgacatatataaa
agatctttgcaaagatcttcaatcagagaatatttctacggtacttacaattcagtttta
agcccttatacaattggtgttgattttgatgatttaactgtatggaaacctaaaaatatg
atagaagatcaggaaaatatggagcaatcctcgccgtcaaagtatactagtgtagaaata
aacgcaagtaatttacaacattcattagtctcattaacatatgcagatcgtaaagaaaat
gaatctgctgtgcagaaagctgctatattaggatatggattagtaacagaagtaaatgaa
aaaaggcataaactgcgtatcttattaccggtcccaggtgcgttgccaaataaagcaatg
gtattgacctcttatagatatttagagtag
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