Treponema putidum: JO40_11500
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Entry
JO40_11500 CDS
T03278
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tpk
Treponema putidum
Pathway
tpk03030
DNA replication
tpk03410
Base excision repair
tpk03420
Nucleotide excision repair
tpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JO40_11500
03410 Base excision repair
JO40_11500
03420 Nucleotide excision repair
JO40_11500
03440 Homologous recombination
JO40_11500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpk03032
]
JO40_11500
03400 DNA repair and recombination proteins [BR:
tpk03400
]
JO40_11500
Enzymes [BR:
tpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JO40_11500
DNA replication proteins [BR:
tpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JO40_11500
DNA repair and recombination proteins [BR:
tpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JO40_11500
NER (nucleotide excision repair)
GGR (global genome repair) factors
JO40_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DUF5454
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIN94637
LinkDB
All DBs
Position
2382391..2385222
Genome browser
AA seq
943 aa
AA seq
DB search
MKDTIYVLDAYGLIYRSYFAFISRPLTNSKGENVSAIFGFFKSLHSIFTEYNPKLFVTAL
DSVTPTFRHEMYKEYKATRDKTPDDLHAQIDKIEEILKTFKLPTVRCNGFEADDVIASIA
ALAEKEDRECVIISGDKDLMQLVSKTTTMLKPGKIKAWEGFDAENVKEEWGVYPAGMLDL
LSLIGDSADNVPGIKGVGPKTAVKLLEEYKTLDGIYSNTKNLKGALKTKIEEGKESAYFS
KELIRLRFDVPVEKDLNAYSTSQMDYEAAARLFISEELPNIAKLYSEKIIAEKALSKHEK
NETSSKENLKQETGLFENSEQTSPEMLPQELGTGEEISLPQNKGDYKLVDEAEELFKIVD
EALKQGLAAYDCETTSEDPLNAEVCGFSIALKEGVAYYFPLKAPCPELGEEAPKLIAFKD
AKKAVTKLFDSKMTLIMHNGKFDIQAALSSKLANCISANLFDTMVAAWLLDPTRSSYGMD
KLAESILNVKTIRFKEVVKDRQNFSDVPLKEACPYAAEDADITFRFYKKFLPLLKKNNLE
KLFFDLEMPITKLLTEMEIKGIFLKGEELTAYSKELGIELEECEKDIYRLVGHEFNIASP
KQLQEVLFEERKLPTSKKTKTGYSTDTSVLENLASEDPVPAKILDYRALAKLKSTYTDTL
PKMTDKNGRIHTSFIQTGTATGRLSSRDPNLQNIPIRGNEGRKIREAFQAEKGRVLISAD
YSQIELVILAHLSKDQNLVEAFNKGIDVHAKTASLIFAVDIKDVTQDMRRIAKTINFGVM
YGMSAFRLASSLRIPRKRADEFIKAYFATYSGVSGFMAKVCQEAEQRGYVETIMGRRRYL
PAINSKNKVEKAGAERIAVNTPIQGTAADIVKLAMLEVDKALKKQKLDASILLQVHDELI
IEAAETEREKVMSLVKEKMEGVIKLSVPLRVSIESGMSWGEFH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatacaatctatgttttggatgcctacgggcttatttaccgctcctactttgcc
tttatttcaagacctcttacaaactctaagggcgaaaacgtttcggccattttcggcttt
tttaaaagccttcattccatatttaccgaatataatcctaaactttttgttaccgcactc
gactcggttacacccacctttagacatgagatgtacaaagaatacaaggccacgcgggat
aaaacgcccgatgacctacatgctcaaatagacaaaatagaagaaattttaaaaacattt
aaacttcctacagtccgctgtaacggttttgaagccgatgatgtaatcgcttccatagcc
gccctcgccgaaaaggaagatcgggaatgtgtgattatttcaggcgataaggacttgatg
cagcttgtttcaaaaaccacgactatgttgaaaccagggaagataaaggcttgggaaggc
ttcgatgccgaaaacgtaaaagaagaatggggcgtttatcctgccggaatgttagacctt
ctttccctaataggcgacagtgccgacaatgttcccggcataaagggggtcggcccgaaa
acagccgtaaagctccttgaagagtataaaaccctcgacggcatttactcaaatacgaaa
aacttaaaaggggctttaaaaacaaaaatagaagaaggaaaggaatcggcttatttttct
aaagagctcataaggctccgtttcgatgttcccgtcgaaaaagacttaaacgcctactcc
acttcgcaaatggattatgaggcggccgcccgtctttttatcagcgaagagcttcccaat
attgcaaaactatattccgaaaaaataattgccgaaaaagccctgtctaaacatgaaaaa
aatgagacttcttcaaaagaaaacttaaaacaagaaaccggtctttttgaaaattctgaa
caaacttctcccgaaatgctcccgcaagaattaggaacaggagaagaaatttcccttcct
caaaacaagggtgattacaaacttgtagacgaagcggaagaactttttaaaatagtagac
gaggccttaaaacaggggcttgcagcctatgactgtgaaactacaagtgaagatcctcta
aatgcagaagtctgcggattctccattgccctaaaagaaggagtggcctattattttcct
ttaaaggctccctgccctgaactgggagaagaagccccaaaactaatagcctttaaggat
gcaaaaaaggcggtaacaaaactatttgactcaaagatgaccctcataatgcataacggt
aaattcgacattcaagccgccctttcgtcaaaacttgcaaactgcatttcggcaaatctt
tttgacacaatggtcgccgcatggcttttggatcccacccgctcttcttacggtatggat
aaacttgcagaaagcattttaaatgtaaaaaccatccggtttaaggaagtcgtaaaggac
aggcaaaacttttcggatgttcctttaaaagaagcctgtccctatgctgccgaagatgcc
gacataacattccggttttataaaaaatttttacccctcttaaaaaagaataatttggaa
aagctcttctttgatcttgaaatgcccataacaaaacttttaaccgagatggaaataaag
ggtatctttttaaagggtgaagaacttactgcctactcaaaagaattgggaatagaactt
gaagaatgtgaaaaggatatttaccggcttgtaggccatgaatttaatatagcctcgcct
aagcagcttcaagaagtcttatttgaagaaagaaaactgcccaccagcaaaaaaaccaaa
acgggctattctacggatacttcagtccttgaaaaccttgcttcggaggatcccgtacct
gcaaaaatcttagattacagagctcttgcaaagttaaaatccacatacaccgataccctt
cccaagatgacggacaaaaacggaagaatccatacaagttttattcaaacaggaacagcc
acaggccgcctttcaagccgagaccctaatttacaaaatatccccataagaggaaacgag
gggcggaagataagggaagcctttcaggcggaaaaggggcgggttcttatctctgcagat
tattcgcagattgagcttgtaatccttgcccatctttcaaaggatcaaaacctagtagaa
gcctttaataaaggaatcgatgttcacgccaagactgcaagcctaatctttgctgtagac
ataaaagatgtaactcaggatatgaggcgcatagcaaagaccataaacttcggcgtaatg
tacgggatgagtgcattccgcctcgcttcttctttaagaattccccgaaaaagagccgat
gagtttataaaggcctattttgcaacctattcgggtgtatccggctttatggctaaagtt
tgtcaagaagccgaacaaagaggctatgtagaaaccataatgggaagaaggcgatacctt
ccggctataaacagcaaaaacaaggtggaaaaggccggagccgaacgaatcgcggtaaac
accccaattcagggcacagccgccgatatagtaaaacttgcaatgcttgaagtcgataag
gctttaaaaaaacaaaaacttgatgcttccatacttttacaggttcatgatgagcttata
atagaggccgccgaaaccgaaagagaaaaagttatgtccctcgtaaaagaaaaaatggaa
ggcgtcatcaaactttcggtgcctttaagggtaagcatagaatcgggaatgagctgggga
gagttccactaa
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