Treponema pallidum subsp. pallidum SS14: TPASS_0644
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Entry
TPASS_0644 CDS
T00716
Symbol
lysS1
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
tpp
Treponema pallidum subsp. pallidum SS14
Pathway
tpp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPASS_0644 (lysS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpp01007
]
TPASS_0644 (lysS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpp03016
]
TPASS_0644 (lysS1)
Enzymes [BR:
tpp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
TPASS_0644 (lysS1)
Amino acid related enzymes [BR:
tpp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
TPASS_0644 (lysS1)
Transfer RNA biogenesis [BR:
tpp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TPASS_0644 (lysS1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
ACD71062
UniProt:
A0A0H3BJB9
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All DBs
Position
complement(706897..708483)
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AA seq
528 aa
AA seq
DB search
MSICEKSLHWADKVAHKIIKECADCDQYTCASGITPSGTVHIGNFREIISVDLVVRALRD
QGKSVRFVHSWDDYDVFRRIPDNVPAQDELKQYIRMPITSVPDPFQQEDSYARHHEREIE
SALPEVGIYPEYVYQSKQYQAGVYAQEIKIALDNRHRIQAILNEYRDEQHKISGTYWPVS
VFCTACHKDCTTVDAWDSHWCLQYHCECGHGEQVDLRQTSAVKLSWRVDWAMRWSKEHVV
FEPAGKDHHSQGGSFDTARLISDHIYHWPAPVSFRYDFIGLKGLPGKMSSSAGKVVGLRD
VLEVYQPEVLRYLFVSTRPNTEFSISFDLDVLKIYEDYDKSERVAWGIHAAKSEHEFMRH
KRIYELSQVRGMPPCISYQVPFRHVCNILQINSGDISAVLAFFSDIHKDQIERFVRRCQC
AWNWIRDAGAPDDFKFTLKEDGVRVPLSAEITEALRLIRDTLVPRTDVLSEKELSAELYA
VARQIPVGSKELFTALYQVLIGKNQGPRLAGFMKVIGTQRLHRMLSVY
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctgtgaaaagtcacttcattgggctgacaaggttgcgcacaagattatcaag
gaatgtgctgactgtgatcaatacacctgtgcatcggggattaccccctcaggaacggta
catattggtaatttcagagagattatttccgttgaccttgtagtgcgggccctgcgtgac
caggggaaatcagtgcgctttgtacattcgtgggacgattatgacgtttttcgtaggatt
cccgacaatgtacctgctcaagatgaattgaagcagtatattcgcatgcctatcacttca
gttcctgatccctttcagcaggaagatagctacgcgcggcaccatgagcgggaaattgaa
tcggcgctcccggaggtaggtatttatcctgaatacgtttatcagtcaaagcaataccag
gcgggggtatacgcacaggaaataaagattgcgctcgacaatcggcaccgtattcaagcg
attttaaacgaatatcgagatgagcagcataaaatcagtggaacgtattggcccgtatcg
gtgttttgtacagcgtgccataaagactgcaccacggttgatgcgtgggatagccactgg
tgtcttcagtatcattgcgagtgtgggcatggggagcaggtggatttacgccagacgtct
gcggtaaaacttagctggcgcgttgattgggctatgcggtggagtaaggagcatgtggta
tttgagcctgcagggaaggatcatcattctcagggaggttcttttgacactgcgcgttta
atttctgatcacatttatcactggcctgcgcctgtttcttttcgttatgattttattgga
ttaaaaggtttgcctgggaagatgtcttcgtccgcgggaaaagtggttgggctgcgtgat
gtgcttgaagtatatcagcctgaagtattgcgatacctttttgtttccacacgtccaaat
accgagttttccattagttttgatcttgatgttcttaagatatacgaggattacgataaa
agtgagcgtgttgcgtggggaatacatgcggcaaaaagcgaacacgaatttatgcggcat
aaaaggatctacgaattgtcacaagtgcgtggtatgccgccgtgcatttcgtaccaggta
ccattccggcatgtatgcaatatattgcaaattaattcgggagatatttctgcagtgctc
gcgtttttctctgatatacacaaagatcagatagagcgctttgtgcgccgttgccaatgt
gcgtggaactggatccgggacgctggtgcacccgatgactttaaatttaccctgaaagaa
gatggtgtgcgcgtgccgctctctgcagagataactgaagcactgagactcattcgtgat
acgcttgtgccacgcactgacgtactcagcgaaaaggaactttctgctgagttgtatgcg
gttgccagacagatacctgttggctcgaaggaactgttcactgcactataccaggtactg
atcggaaagaatcaggggccacggcttgcgggtttcatgaaagtcatcggtacacagcgt
ttgcaccgcatgcttagcgtatactaa
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