Trifolium pratense (red clover): 123887494
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Entry
123887494 CDS
T08949
Name
(RefSeq) protein phosphatase PP2A regulatory subunit A
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123887494
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123887494
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123887494
03036 Chromosome and associated proteins [BR:
tpra03036
]
123887494
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123887494
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123887494
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123887494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
CLASP_N
Cnd1
TAF6_C
Motif
Other DBs
NCBI-GeneID:
123887494
NCBI-ProteinID:
XP_045792775
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Position
LG5:complement(3172236..3179045)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLATAEELGVFVPYVGGVEHASVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQ
DLVDHFIPLVKRLASGEWFTARVSSCGLFHIAYPSAPEALKTELRTIYGQLCQDDMPMVR
RSAATNLGKFAATVEAAHLKTDIMSVFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDSTKTELVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILSPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPEWAMQHIIPQV
LDMINDPHYLYRMTILHAISLLAPVLGSEITSTNLLPLVVNAAKDRVPNIKFNVAKVLQS
IIPIVEESVVESTIKPCLVELSEDPDVDVRFFASQALQSSDQVKMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggatcaacctttatatccaatcgctgttctaatcgacgagttgaagaac
gaggacattcaactccggttgaactcgatccgtcgtctttcgacgattgcgcgtgcgctg
ggcgaagagagaacaaggaaagaactgattccttttctgagcgagaataacgacgatgat
gatgaggtgcttcttgctacggcggaggaattgggagtttttgttccttatgttggtggt
gtggagcatgctagcgttttgcttccacctttggaaactctttgtactgttgaggaaact
tgtgttagggataaatcggtggagtcactttgtagaattggtgctcagatgagggaacaa
gatttggttgatcacttcattcctttagttaagaggctggcttctggggagtggttcact
gccagggtttcttcatgcggcttgtttcatattgcataccctagtgcaccagaggcgttg
aaaactgaactgagaaccatatatgggcagctgtgtcaagatgatatgcctatggttagg
agatctgctgctactaaccttggaaaatttgctgctactgttgaagctgctcacttaaaa
acggacatcatgtctgtgtttgatgatctcacacaggatgatcaagattctgttcggctt
cttgctgttgagggttgcgcagctcttggaaagttgttggagcctcaagattgtgtggca
catattcttcctgttatagtgaatttttctcaggataagtcatggcgtgttcgttacatg
gttgccaatcaactctatgagctctgtgaagctgttggtcctgattccacaaagacggaa
ttggttcctgcttatgttcggctgctgcgtgataatgaagctgaagtacgtattgctgct
gctgggaaagtgactaagttctcccgcatattaagtcctgaactagccattcagcatatt
ctaccatgtgtaaaggaattatcgacagattcatctcaacatgttcgctctgcgttggct
tcagttataatgggaatggcaccagtcttagggaaggatgccacaattgagcaacttctc
ccgattttcctctctcttttgaaagatgagtttcctgatgtcaggctaaatattatcagc
aagcttgatcaagtgaaccaggttattggtatcgacctcttatctcagtcgctattacca
gctattgttgagcttgctgaggacagacactggagagttagacttgcaatcatcgaatat
ataccattgttagcaagtcagttgggtgttggcttttttgatgataagcttggagctctt
tgcatgcaatggctaaaggacaaggtatactcaatccgggatgcagctgccaataatgtc
aaacgcttagcagaagaatttggaccagaatgggcaatgcagcacattattccccaggtt
ttggacatgattaatgatccacattatctgtatcggatgacaattctacacgcaatttct
ctgttagctccagttctgggctcggaaattacttccacaaacctgctgcctctagttgtt
aatgcagcaaaagatagggtaccgaatatcaaattcaatgttgccaaagtattgcagtct
atcattccaattgttgaggaatctgttgtggagagtaccatcaaaccgtgtctggttgag
ctcagtgaggatccagatgttgatgtgcggtttttcgcttctcaagctctacaatctagt
gatcaagtgaagatgtccagctag
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