Trifolium pratense (red clover): 123897625
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Entry
123897625 CDS
T08949
Name
(RefSeq) long chain base biosynthesis protein 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00600
Sphingolipid metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123897625
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpra01007
]
123897625
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
123897625
Amino acid related enzymes [BR:
tpra01007
]
Aminotransferase (transaminase)
Class II
123897625
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
DUF3755
DUF6434
Motif
Other DBs
NCBI-GeneID:
123897625
NCBI-ProteinID:
XP_045804297
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Position
LG1:40746771..40752213
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AA seq
484 aa
AA seq
DB search
MMASNVLNVFNNTLDWVTYALDAPSARAVVFGFNIGGHLFVEVLLLVVILFLLSQKSYKP
PKRPLTDKEIDELCDEWVPQPLIPSLNEEMHYEPPVLESAAGPHTIVNGKEVVNFASANY
LGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGL
STMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLEKITSKY
KGTKNLRRYIVVEALYQNSGQIAPLDEIIKLKEKYRFRILLDESNSFGVLGSSGRGVTEH
YGVPVEKLDLITASMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAIAA
IDVLDENPNLLTKLKDNIAVLWKGLSNIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLL
GNIAERVLKEDSVFVVASRRSTLDKCKLPVGIRLFVSAGHSESDLHKASESLKRVATLVL
GGHS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcaaatgttctcaatgtattcaacaatacgttagattgggtgacttatgct
ttagatgctccttctgcacgagctgtagtctttggattcaatattggtggacatttattt
gtcgaagttttacttctggtggtcatacttttcttgctttcccagaaaagttacaagcct
cctaaaagacccttgacagacaaggaaattgatgaactatgtgatgaatgggttccacaa
ccccttattccctctcttaatgaagagatgcactatgaaccaccagtgttggagagtgct
gctggaccacataccatagttaatggtaaagaagttgtaaattttgcttcagcaaactat
cttgggcttataggtcatcaaaagttacttgactcatgttcgtctgctttagagaaatat
ggtgttggttcttgtggtcctcgtgggttttatgggacaattgatgtccatcttgactgt
gaagcgagaatagcaaaatttttaggaacacctgattcaattttgtactcttatggactt
tccaccatgttcagtgctattcctgctttctctaaaaaaggagatataattgtggcggac
gagggagttcattggggaatacaaaatggcctttatctttctagaagcacagtggtatat
tttaagcacaatgacatggattctttaagagaaactttagagaaaattacttccaaatat
aaggggaccaaaaatttgaggcgttatattgtcgttgaagctctttaccagaattctggc
caaatagcacccttagacgagatcattaaattgaaggaaaaatatcgttttcgtatttta
cttgatgagagcaactcgtttggtgtgcttggaagttctggaagaggtgtcactgaacac
tatggagtaccggttgagaagttagatcttataactgcttctatgggacatgcattggcc
acagaaggaggattctgcaccggaagtgcaagagttatagatcatcaacgattgagtagc
tctggctacgtcttttctgcttctttgcctccatatcttgcaagcgctgcaattgcagcc
attgatgtccttgacgaaaatcccaatctgttaacgaagttgaaggacaacattgctgtc
ttatggaaagggttatcaaatataccaggattcacaattgcaagtcatccagagtctccg
attgtttatttgagattaaagaagtcaaccggttctttgaaagatgacctacatctgctt
ggaaatattgccgagcgtgttttgaaggaagattctgtatttgtggtggcttccagaaga
tcaacattggacaagtgtaaattgcctgtaggaattagattgtttgtttctgcagggcat
tcagaatctgatcttcacaaggcatctgaatcattgaaaagggttgcgacattagtcctc
ggtggtcatagttga
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