Trifolium pratense (red clover): 123900142
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Entry
123900142 CDS
T08949
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123900142
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpra01009
]
123900142
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123900142
03036 Chromosome and associated proteins [BR:
tpra03036
]
123900142
Protein phosphatases and associated proteins [BR:
tpra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123900142
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123900142
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123900142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EZ
PDS5
Adaptin_N
Cnd1
CLASP_N
Motif
Other DBs
NCBI-GeneID:
123900142
NCBI-ProteinID:
XP_045807430
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Position
LG1:complement(2311323..2319042)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMADEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLTENNDDD
DEVLLAMAAELGGFIPYVGGVEHASALLPPLEAFCSVEETCVRDKAVESLCRIGSHMRDT
DLVEYFIPLVKRLAAGEWFTARVSACGLFHIAYPSAPEASKTELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVEYTHLKADIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRAELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSSEHAIQNILPCVKELSSDSSQHVRSTLASVIMGMAPVLGKETTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVTFFDDKLGALCMQWLQDKVHAIREAAANNLKRLAEEFGPDWAMQHIIQKV
LEMINNPHYLYRMTILRAISLLAPVVGPEVTCSNLLPAVVAASKDRVPNIKFNVAKVLQS
IFPIVDQSVVEKTIRPCLVELSEDPDVDVRYFSSQALQAIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggctgatgaaccactgtatccaatagctgtgcttatagacgagctcaaaaac
gatgatatccaactgcggttgaactcaattcgcaagctatccacaattgcccgtgctctt
ggggaggagagaacacgtaaagaattaattccatttttgactgaaaataatgacgatgat
gatgaggtgcttcttgcaatggcggcagagttgggaggtttcattccttatgttggtgga
gtggaacatgctagtgcattactcccacctctcgaggcgttttgcagtgttgaggaaact
tgtgtgagggataaagctgttgagtcactttgtcgaattggatctcatatgagggacact
gatctcgttgaatattttatcccattggtcaagagattggcagcaggtgaatggtttact
gcacgagtctctgcatgtggtctattccatattgcttaccctagtgcaccagaagcatca
aagacagagttgagatcaatatacagtcagttatgtcaggatgacatgcctatggttaga
agatctgctgcaacaaatcttgggaaattcgctgcaactgttgagtatactcacttgaag
gctgacatcatgtctatttttgacgatcttactcaggatgatcaagattctgtcagattg
ttggctgtggagggatgtgctgccctcggaaaactgttggagccacaagattgtgttgca
catatactcccagttattgttaatttctcccaggataagtcttggcgtgtgcgttatatg
gttgcaaatcaattgtatgagctctgtgaagctgtaggccctgaacctaccagagcggaa
ttggtccctgcctatgttcgattgcttcgagataatgaggctgaggtacgcatagcagct
gcggggaaagtcaccaagttttgtcggattttaagttcagagcatgcgattcagaatatt
cttccttgtgtaaaggaattgtcatcagactcttcgcagcatgtccgctctactttggct
tctgtaataatgggaatggccccagtgttaggaaaggaaacaacaattgagcatcttctt
cctattttcctgtcccttctgaaggatgaatttcctgatgtgcgcctaaacatcatcagc
aaacttgatcaagtgaatcaggttattggaatcgatctattatctcaatctttattacca
gccattgttgagcttgcagaggataggcattggagggtacggcttgcaattatagagtat
atacccttattggcaagtcaattgggggttacattttttgatgacaaattgggtgctctt
tgcatgcagtggttacaggataaggttcatgcaattcgtgaagcagctgctaacaacttg
aaacgtctagctgaagagtttggtcctgattgggctatgcagcacataattcagaaggtt
ttggagatgattaacaatccacactatttgtatcgaatgacaattcttcgtgctatctcc
ctgctagcccctgtagtgggccctgaagtcacttgttctaacttgttgcctgctgttgtt
gcagcatcgaaagacagagtgcccaacattaagttcaatgtggcaaaggtattacagtcc
atcttccccattgtggatcagtctgtggtagaaaagacaattcgaccatgtctggttgag
ctcagtgaggatcctgatgttgatgtgcgatatttttccagccaagctttgcaggcaatt
gataatgtcatgatgtctagctag
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