KEGG   Trifolium pratense (red clover): 123905966
Entry
123905966         CDS       T08949                                 
Name
(RefSeq) rDNA transcriptional regulator pol5-like
  KO
K02331  DNA polymerase phi [EC:2.7.7.7]
Organism
tpra  Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tpra03036]
    123905966
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123905966
Enzymes [BR:tpra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     123905966
Chromosome and associated proteins [BR:tpra03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123905966
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    123905966
SSDB
Motif
Pfam: DNA_pol_phi Phage-scaffold
Other DBs
NCBI-GeneID: 123905966
NCBI-ProteinID: XP_045811731
LinkDB
Position
LG2:complement(30253806..30261414)
AA seq 1263 aa
MGSTTKNKRNNSVSDEHEESNKDSHEKPLNKKPKTTTDSSTTPTMETHKKSKAFDKNRRK
DKLKSKLESKSKSEPVDLDSKPTADSTSGGTSGGDSPPEFHISVFKDLAVVDDSARSAAA
KQMVTELKAVQNAYGVQDMDIDDGGFKLEAEKNDGLDECAPSVRYAVRRLIRGVSSSREC
ARQGFASGLAVLVGAIDKIRIGSFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALVRS
GRLIHEWSMDKNTPYIKEFVGILISLASKKRYLQEPAVSIILELVEKLPVEAIASHVIEA
PGLDKWFESAAGVGNPDALFLALKVREKISIDSSIYGKLLPNPFSSSQLFSADHLSSLSN
CLKESTFCQPRVHSVWPVLINNLIPNTVSQLEDVASASNSLKKHKKSRKSCSSDEEIAKN
LKSFCEIIIEGSLLFSSHDRKHLAFEVMSLLLQKLSASLIPVVLSNKVVQCLMDILSNNN
TWLKKVGLEFLKQLTDWVGDDDVKRVAVIVAIQKHSNGKFDCIAKTKHVKNLMSRFKTEA
GCMLFVQNLMNLFVDEDNTLEEPSDQSQTTDENSEIGSIEDKDSPRTNGNSDLLKRWVIE
SLPGILKFDKRDHGEMFRVQKEIMKFLAVQGLFTASLGTEVTSFELDEKFRWPKSPTSNA
LCKMCIEQLQLLLANAHKVESMANANSLEPNDLGSYFMKFFSTLCNIPSVSLFRSLDDED
EKAVKNLQAMEAKLSIEERSHDCSDDANRDRALRYLLIQLLLQVLLCPREYSEAASELII
CCKKTFSTSDIPESSGEDVTEVGDAPELMDVLVDTLLSLLPQSSAPMRSAIDQVFKCFCN
DITDDGLGRMLRVIKKNLKPARHPDAASADEDDDDEDDDLFNIEDEEIDQAETGETGDSD
GQTDDSESVFEAEETGQDHHEDSDDSDSGMDDDAMFRMDTYLAQIFKEKKNQAGSETAHS
QLLLFKFRILSLLEIFLRENAGKPQVLTVYSHLARAFVNPHTAEVSEQLSQRILGILQKK
ILKGKAACPKGDEIQLSTLESLLERNLKLASRPFKKQKSATASKQKSALNRHKTVSSFAQ
KSTLWILRIVDARNFTVSERQRIVQVFQKTVADYLDSKKSQIKAGFLKEIIQRRPWIGHG
LFGFLLERCGSAKSDFRRVETLDLVMNILKSLATSGGEVQNASKKIVKNHLDKLSHSMKE
LVTNMPSKPARRTAVLKFCVEVFKIMAKYNLTKYLLKTLAPDAQAALKAQLGEKFVSLKK
LEK
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgggtagtaccacaaaaaacaaacgcaacaattccgtttccgacgaacacgaagaatcc
aacaaagattctcacgaaaaacctctcaacaaaaaacctaaaaccaccaccgattcttcc
accacaccaacaatggaaactcataaaaagagtaaagctttcgacaaaaacaggcgtaag
gacaaattgaaatcaaaattagaatccaaatcgaaatccgaaccggttgatttggattcc
aaacctactgcggattcgactagtggtggtactagtggaggtgattctcctccggagttt
cacattagtgtgtttaaggatttagctgtggttgatgattcggctaggtcagcagctgct
aaacaaatggtgacggagttgaaggctgttcagaatgcttatggtgttcaagatatggat
attgatgatggtggttttaagcttgaagctgagaaaaatgatggattggatgaatgcgca
ccatctgttcgatatgctgttcgtaggcttattcgcggtgtttcttcttcaagagagtgc
gcgcgacaaggttttgcttcaggcttagcagttttagttggtgctatcgacaaaatcagg
atcggctcattccttaagctcgtagtagatttattggaagtaacttcatcaatgaagggt
caggaagcaaaagattgtcttctgggtcgcttatttgcttatggtgctctggttcgatca
ggaagacttatccacgaatggagcatggataaaaataccccatacataaaagaatttgtt
ggtatacttatctcccttgcaagtaagaagcgatacttgcaagagcctgccgtctcaata
attttagaattggttgaaaagttgcctgttgaagcaatagcaagtcatgttattgaagct
cctggactcgacaagtggtttgaatctgctgcaggagtaggaaatcctgatgctctattc
cttgctctaaaagttcgagagaaaatttctatcgacagctccatatacgggaaactactg
ccaaatccgttcagctctagccagctcttctctgccgatcacctgtcctccctgagtaat
tgtttgaaggaatcaaccttctgtcagccccgtgttcatagtgtttggccggttttgata
aataatctcatacccaatactgtttcacaattggaagatgtggcatcagcttcaaattca
ttaaagaaacataagaagagtagaaaatcttgctcttctgatgaagaaattgcgaagaat
ctcaagtctttttgtgaaattattattgaaggatcccttctcttctcatctcatgaccgt
aagcacttagctttcgaagttatgtctcttcttctacaaaagctgtctgcatctttaatt
ccagttgttctgtcaaacaaagtcgttcagtgcctgatggatatactatcaaataataac
acatggctgaagaaagttggactagagtttcttaaacaattgacagattgggtgggggac
gatgatgtcaaaagagttgctgttatagtggctatacagaagcacagcaatggaaaattt
gattgtatcgcaaagacaaagcatgttaaaaatttgatgtcacggttcaaaacagaagct
ggttgcatgctttttgtgcaaaacttgatgaacctgtttgtcgatgaagataataccttg
gaagaaccttcggatcagagtcaaacaacagatgaaaattctgaaataggctctattgag
gataaagattctcctaggactaatggtaattcagacttattgaagagatgggttatagaa
tcccttcctggtattttgaaattcgataagcgggaccacggggagatgttccgagtacaa
aaagaaataatgaaatttctggctgttcagggtctgtttactgcatctcttggcactgag
gtgacttcatttgagttggacgagaaatttaggtggcccaaatctcccacatcaaatgct
ctttgcaagatgtgtattgaacagctgcagttgttgttggctaatgctcataaggtagag
agcatggctaatgctaatagccttgagcctaatgatctgggttcgtacttcatgaagttc
ttcagcaccttatgcaatattccttcagtttccctcttccggtctttagatgatgaggat
gaaaaagcagtgaaaaatttgcaagcaatggaagctaaattatcaatagaggaaaggagc
cacgactgcagtgatgatgcaaatagagatcgtgcactgagatacttgcttatccagttg
ctcttgcaagtccttctttgtccaagggagtactcagaagctgcgtctgaactcatcatc
tgttgtaagaaaacattttctacttctgatattcctgagtcctctggagaagatgtcaca
gaggttggtgatgcacctgagttgatggatgttcttgtggatacattgctctctctgctt
ccacagtcatcggctcctatgcggtctgctattgatcaggtgttcaaatgtttttgtaat
gatatcacggatgatgggctggggcggatgttacgagtcataaagaaaaatttaaagcca
gcaagacatccagatgcggctagtgcagatgaagatgacgacgatgaagatgatgactta
ttcaatattgaagatgaagaaattgatcaagcagagactggtgaaacaggtgatagcgat
gggcagactgatgactctgagtctgtatttgaggcagaagaaactggtcaggaccatcat
gaagattctgatgattcagatagtgggatggatgatgatgcaatgttcaggatggataca
tatcttgctcagattttcaaagaaaagaaaaatcaggctggaagtgaaaccgctcattcc
caacttttgttgttcaaattccgtatcctttcattattggaaattttcctacgtgaaaat
gcaggcaagcctcaggttcttactgtgtactcacatttggctagggcctttgttaaccca
catactgctgaagttagtgagcagctgagtcagcgtatattgggaatattgcaaaagaaa
atacttaaaggaaaggcggcctgtccaaagggtgacgaaatccaattatcgacgcttgaa
tctctgttggagagaaatttgaaattagcatcaagaccatttaaaaagcaaaagtctgca
actgcctcaaagcaaaagtctgccttgaaccgacacaaaacggtttcttcctttgcacaa
aaatcaactttatggattttgagaattgtcgatgcaagaaatttcacggtgtccgaacgg
cagaggattgttcaagttttccagaaaacagtggctgattatttagacagtaagaagtct
caaatcaaagctggatttttaaaagaaataattcaaagaaggccatggattggccatggt
ttatttggctttttgttggagagatgtggaagtgccaagtcagattttcggcgagtcgaa
acccttgatttggtaatgaacatattgaagtcgttagcaacctcgggtggtgaagtgcag
aatgcatcaaaaaagattgttaaaaaccatttggataaactctctcattctatgaaagag
ttggtgacaaatatgccaagtaaaccggcaagaaggacagctgtactcaagttttgtgtc
gaggtcttcaagatcatggctaaatacaacctcaccaagtatcttcttaaaacattggca
cctgatgctcaagctgccctcaaagcacaacttggtgagaaatttgttagtttgaagaag
ctggaaaaatga

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