Trifolium pratense (red clover): 123908203
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Entry
123908203 CDS
T08949
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123908203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123908203
04147 Exosome [BR:
tpra04147
]
123908203
04090 CD molecules [BR:
tpra04090
]
123908203
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123908203
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123908203
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123908203
CD molecules [BR:
tpra04090
]
Proteins
123908203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_21
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_15
AAA_16
AAA_22
AAA_30
G-alpha
AAA_28
MeaB
CrtO
Motif
Other DBs
NCBI-GeneID:
123908203
NCBI-ProteinID:
XP_045814718
LinkDB
All DBs
Position
LG2:52900129..52906515
Genome browser
AA seq
1243 aa
AA seq
DB search
MGNKGGFFRYADGFDKLLLFFGTLGCIGDGIQTPLTMLVLGNLIDDYARGGSDHTVSIDN
INKYALKLVGIAIGVAFSAFIVGVCWTRTAERQTSRMRIEYLKSILRQEVGFFDKQSNSS
TTFQVIATITSDAQTIQDTMSDKVPSTLVHLSAFFSSFIVALFLSWRLAVAAFPFSIMMI
MPALIFGNSMKELGGKMKDAFGVAGSIAEQAISSVRTVYSYVGEKQTLKRFSSALETCMQ
LGIKQGQTKGVVIGSFGLLYATWAFQSWVGSVLVRTKGEKGGHVFCAEISIIWGGLSLMS
ALPNLASILDATVAATRIFEMIDRKPTINSTKEKGRILKRTRGEITFKEVEFSYPSRPDT
PILQGLNLKVQACKTVGLVGGSGSGKSTIISLLERFYEPTCGEILLDGHDIKRLHLKWFR
SLIGLVNQEPILFATSIRENILFGKEGASMEDVIAAAKDANAHDFIVKLPNGYETPVGQL
GAQLSGGQKQRIAIARALVRDPKILLLDEATSALDSQSERVVQDALDMASRGRTTIIIAH
RLSTIRKADSIVVLQSGKVVECGSHNELLQLNNGQGRIYTKMLHLQQISQNENAQHQINK
SPHAMENLITSSHSSWQSTPIHHTFSAAQPFSAIYSISAIDSSFDDDYSSENLEKPYSSN
ISHWRLLQMNAPEWKHALFGCLGAISSGMCQPFYSYCLGIVASVYFIDDNSRIKSQIRLY
SIIFCCIAAVNFISGIIQHYNFSIMGERLLKRVRENLLEKVLTFEIGWFDQEENTSAAIC
ARLATEANLVRSLVAERMSLLVQVFVTALLAFVLGLIVSWRVAIVMIAMQPLVIACLYSK
TVLMKSMSGKAKSAQRDASQLAMEATTNHRTITAFSSEKRILNLFRTAMDGPKKESIKQS
WISGSILSMSQFMTTASIALTFWYGGILLNHKLVESQQLLQVFLILMGTGRQIADTGSMT
SDISKSGRAISSVFAILDRKTQIEPEDTRHRKFKKTLKGDIKLKDVFFSYPARPDQMILK
GLNLDIEAGKTIALVGQSGSGKSTIIGLIERFYDPIKGSIFIDNCDIKELHLKSLRSHIA
LVSQEPTLFAGTIRDNIVYGKEDASEDEIRRASRLANAHEFISSMKDGYNTYCGERGVQL
SGGQKQRIAIARAMVKNPSILLLDEATSALDSVSENLVQEALDKMMVGRTCVVIAHRLST
IQSVDSIAVIKNGKVVEQGSHSELLNNRSNGTYYSLIRLQQSH
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaaaggtggatttttccgttatgcagatggatttgataagttactattattc
tttggaactttgggttgcattggagatggtatacaaactccactcactatgcttgttctt
ggtaatttgatagatgattatgctcgtggtggttctgatcatactgtatccattgataat
atcaacaagtatgctctcaagctagttggtattgccattggagttgctttttctgctttt
attgtaggagtatgttggacaagaactgcagaaagacaaacttcgcgaatgagaattgaa
tatcttaaatcaatcctaaggcaagaagttggtttctttgacaagcaaagtaactcttcc
acaacattccaagtaattgcaaccataacttctgatgctcaaacaatccaagacaccatg
tctgataaggtacctagtactctagttcatctgtcagcatttttctctagctttatagtg
gcactattcctctcttggagacttgcagtagctgcttttccattttcaattatgatgatc
atgccagcactcatatttggaaattctatgaaagagcttggtggtaaaatgaaggacgcg
ttcggagttgctggtagcatagcagaacaagcaatctcatcggttcgaactgtttattcg
tatgtaggtgagaagcaaacactgaaaaggtttagttctgctcttgaaacatgtatgcag
cttggcataaaacaaggtcaaacaaagggagtggttattggaagttttgggttgctatat
gctacttgggcattccaatcttgggttggaagtgttctggttaggaccaaaggagaaaag
ggtggccatgtgttttgtgctgaaataagcattatttggggtggattgtctctgatgagt
gcactcccaaatctggcttccatattagacgcaacagtagcggctactcggattttcgag
atgattgacagaaagccaaccataaactctaccaaagaaaaaggaaggattttgaagcgt
acaagaggagagattacatttaaagaggttgagtttagttacccttcaaggcctgataca
ccgattctacaaggactcaatcttaaagttcaggcatgtaaaacagtaggactagttgga
ggaagtggttctggcaaatcaactataatctctttacttgaaagattctatgagcctaca
tgtggtgagatattacttgatggacatgatataaagagactgcaccttaagtggtttagg
tctctgataggattggtaaatcaagagccaattctctttgcaacatccataagagagaac
attctatttggaaaggaaggagcttcgatggaagatgtaatagccgcagcgaaagatgca
aatgcacatgatttcattgttaagcttcctaatggatatgaaactccagtaggacaacta
ggagctcaattgtctggaggacaaaagcaaaggattgctattgcaagagctttagtaaga
gaccctaaaatcctactacttgatgaagccactagtgctttggattcacaatctgaaaga
gtagtacaagatgcacttgacatggcttctagaggtagaacaacgatcatcatagctcat
cgtctttccacaattcgaaaagctgattcaatagtagttcttcaatcaggaaaagtggtt
gagtgtggttcccacaatgaactacttcaactaaacaatggacaaggtcgaatttacaca
aaaatgcttcatttgcaacaaataagtcaaaatgaaaatgcacagcatcaaataaacaag
agtcctcatgcaatggaaaatctaataacaagttcacattcaagctggcaaagtacacca
attcatcatacatttagcgccgcacaaccatttagtgccatatattcaatcagtgctata
gattctagctttgatgatgactacagcagtgaaaacttggagaaaccttacagttccaac
atctctcactggcgtttactacaaatgaacgctcctgaatggaagcatgctttgtttgga
tgcttaggtgccattagctcaggaatgtgccagccattttattcctattgcttaggaata
gttgcttcagtctactttatagatgataactctcgcatcaaatcacaaatcaggttgtac
tcaatcatcttctgctgcatagctgctgtgaacttcatctcaggcatcattcaacattac
aatttttccatcatgggagagcgtttgttgaaaagggtgcgagaaaatttgctagagaag
gtgttgacctttgagataggctggtttgatcaagaggagaacacaagtgcagcaatctgc
gcgcgtttggctaccgaagccaacttggttcgatcccttgttgcagaacgaatgtcgttg
ttagttcaggtttttgtcactgctttgctggcttttgtacttggtttaatcgtttcatgg
agggtagctattgtgatgatagctatgcagcctttggtcattgcatgtctctattcaaaa
accgttctcatgaagagtatgtcaggcaaagcgaaaagtgctcaaagagatgctagtcaa
ttagcaatggaagctactaccaaccacaggactatcactgcattctcttccgagaaaagg
atactaaatttgttcagaactgctatggatggtccaaagaaggaaagcatcaagcaatca
tggatttcaggttctatattgtctatgtcacagttcatgacaacagcatctatagctttg
actttttggtatggaggcatactattaaatcataaacttgtcgaatcacagcaactctta
caagttttcctgattttgatgggcactggccgacaaattgccgatacaggaagcatgact
tctgacatatctaaaagtggaagagccattagttcagtatttgcaatacttgataggaaa
acacagattgaacctgaagatactagacacagaaagttcaaaaagactttgaagggtgat
ataaaactgaaagacgtgtttttctcgtaccctgcaaggccagaccaaatgattctcaag
ggcctaaatcttgatattgaagctggcaaaacaatagcattagtaggacaaagtggctca
ggaaaatctaccatcattggcttaattgaaagattttatgaccctattaagggttcaata
ttcatagacaattgtgacattaaggaacttcatttgaaaagtttgagatcacatattgca
ttggtgagtcaggaacctaccctctttgcaggaaccatacgcgacaacatcgtatatggt
aaggaagatgcatcagaggatgaaatccgaagggcttcacgtcttgcaaatgctcatgaa
tttataagttcaatgaaagatgggtataatacatactgtggagaaagaggagtgcagcta
tcaggagggcagaagcagagaatagcgatagctcgagcaatggtgaagaatccatcaatt
cttctgttagatgaggcaacaagtgctcttgacagtgtgtcagaaaatctagtacaagaa
gctttggataaaatgatggttggaagaacatgtgtagttatagctcatcgtttgtcaact
atacaaagtgttgattccatagctgtgattaaaaatggaaaggtggtagaacaaggttct
cactcagagttactgaacaatagatcaaatgggacttattactctttaattaggctacaa
cagagtcactaa
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integrated database retrieval system
