Trifolium pratense (red clover): 123915582
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Entry
123915582 CDS
T08949
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00270
Cysteine and methionine metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
123915582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123915582
03032 DNA replication proteins [BR:
tpra03032
]
123915582
03036 Chromosome and associated proteins [BR:
tpra03036
]
123915582
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tpra02048
]
123915582
Enzymes [BR:
tpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
123915582
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123915582
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
123915582
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123915582
Prokaryotic defense system [BR:
tpra02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
123915582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
123915582
NCBI-ProteinID:
XP_045822704
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Position
LG3:complement(5129435..5138699)
Genome browser
AA seq
873 aa
AA seq
DB search
MASKRKTRSSSTSSGDVVVLTADSNSANTQTKSTKKTRSSSSGNAQKKSRKKTNLDTASS
AVETNQASETVPVIVDGNDEEDEVSSSRFLGDPVPDEEAKLRWPKRYQEKEKKSTGSRSN
SSDDEEIIRARCHYTSAEVDESVIYKLFDDAHVQGPEGGDHYICKIIEMFEAIDGRLYFT
AQWYYRAKDTAIKDLGYLIEPKRVFFSEVQDTNPLDCLVEKLNIARLQLNVDFDAMKEVI
PPCDYYCDTLYLLPYLTFVKLPSETIENGSESSSTISSETEVNGRYEVNSKNANVDISEE
RKEPELKLLDLYSGCGAMSTGLCQGGILSGSNIVTRWAVDLNQHACESLKLNHPETEVRN
ESAEIFLSLLKEWEKLCCYFSLIDSNVPHDEYLNLFSAEEEDEEADGTDCEESNNEEIFE
VAEVHDIRFAEANKENKPGLYFKVSWKGYESDEDSWEPIDGLSNCKERIKDFVIRGFKSN
ILPLPGYVDVVCGGPPCQGISGFNRFRNNKNPLQDEKNQQLVVFMDIVSYLRPRFTLMEN
VVDLVKFSNGFLGRYALGRLVQMKYQSRLGIMAAGAYGLPQFRLRVFIWGAAPSEKLPQF
PLPTHDVIVRGFVPSEFEGSTVAYNEGHTVHLQNKLILKDAIFDLPQIENSEIRDEIEYD
KPPETEFQQFIRLSKSEMLGISNEMKSSKSFLHDHRSLQLNTDDYQRVCRIPKTKGACFR
DLPCVRVRDNVVELNPDVKREYLPSGKPLVPDYAISFVGGTSRLPFARLSWDETVPTVVT
RAEPHNQKILHPDQDRVLSIRENARLQGFPDFYKLCGPVKQRYMQVGNAVAVPVARALGY
CLGRAFQGASDDESLYTLPDKFPMIKGQISSKI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaagcgcaaaactaggtcatcctccacctcctccggtgacgtcgtagtcctt
acagccgattcaaattccgccaacactcaaactaaatcaacaaaaaagactaggtcatcc
tcctccggcaacgctcagaaaaaatctaggaagaagacgaatctggatactgcttcttct
gctgtggaaacgaatcaagcaagtgaaactgttccagtgatagttgacggtaacgatgag
gaagatgaagtttcgagctccagatttcttggagatccggttcctgacgaggaagctaaa
ctgcgctggccaaaacggtaccaagagaaggaaaagaaatccacgggttcacggtctaat
agtagtgatgatgaggaaattattcgagctcggtgtcactacacttcagctgaagttgac
gagagtgtgatttacaaactctttgatgacgctcatgtgcaagggccggaaggaggtgac
cattacatttgtaaaatcattgagatgtttgaggcgattgatgggcgattgtacttcact
gcacaatggtattatagagcaaaggacacggccattaaagaccttggatatcttattgaa
ccgaagcgagttttcttttcggaagtccaggatactaacccattagattgtcttgttgaa
aagttaaacattgccagattacagctaaatgtggattttgatgcaatgaaggaagttatt
ccaccttgtgattattactgtgatacactctatcttctgccttacctcacatttgttaaa
ttaccatcagaaactatagaaaatggcagtgagtcttcatccaccatttcttcagaaact
gaagtgaatggaagatacgaggttaactctaaaaatgcaaacgttgatattagtgaagaa
aggaaagaaccagagctgaagttgcttgatttgtattctggatgtggggcaatgtcaact
ggattgtgtcaaggtggaattctgtccggttcgaatattgttacgagatgggcagttgat
cttaaccaacatgcttgtgagagtcttaaactaaaccatccggaaactgaggttcgaaat
gaaagcgcagaaattttcctctcattgttgaaagaatgggagaaactttgttgttatttc
tctttgatcgatagcaatgtgccacatgacgaatacttaaacctctttagtgcggaagag
gaagatgaagaggctgatgggactgattgcgaagagagtaacaatgaggaaatctttgaa
gttgcagaagtgcacgatatacgttttgctgaggcaaataaggaaaacaaacctgggtta
tactttaaggtttcatggaagggctacgaatctgatgaagatagctgggaacccattgat
ggtttgagtaattgtaaggaaaggataaaagattttgtgattcgtggcttcaagtcaaac
attctaccattgccaggatatgtggatgtagtatgcggcggacctccatgtcaaggaata
agtgggttcaaccgttttaggaacaataaaaatcccttacaagacgaaaagaatcaacaa
cttgttgtttttatggacattgttagttatcttcgaccgagatttacattgatggagaac
gtagtcgatctcgtaaaattttcaaacggctttcttggaagatatgcattgggccgatta
gtgcaaatgaaatatcaaagccgtttgggaattatggcagccggagcttacgggcttcct
caatttcgactacgtgtcttcatatggggggctgcaccttcggagaagctgcctcagttt
cctcttccaactcacgatgttatagtaagaggttttgttccttcagagtttgagggcagc
acggttgcttataatgaagggcatactgttcatctgcaaaacaaacttatattgaaagat
gctatttttgacctacctcagattgagaatagtgagattcgggatgaaattgaatatgac
aaacctcctgagacagagttccaacagttcatcagattaagcaaaagtgaaatgttgggt
atttcaaatgagatgaagtcttcaaagtcattccttcatgatcaccgttctttacaactg
aataccgatgattatcaacgcgtgtgtcggatcccaaagacgaagggagcatgctttaga
gatttaccttgtgttcgtgtgcgggacaatgtagtcgaattgaatcctgatgtcaagcgt
gaatatttgccttcgggaaagccactggttccggattatgcgatttcttttgtgggtgga
acttcacgattgccttttgctcgattatcgtgggatgaaactgttccaactgttgtcaca
agagcagaacctcataatcagaaaattttgcatccagatcaagatagagtattatcaata
cgtgaaaatgccagacttcaaggttttcccgatttctataagctatgtggacctgtcaaa
caaaggtacatgcaagttgggaatgcagttgcggttccagttgctcgagctttaggatat
tgtcttggccgtgcatttcaaggtgcttctgatgatgagtcattgtacaccttgcccgat
aagtttcctatgatcaaaggacaaatttcctctaaaatctga
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