Trifolium pratense (red clover): 123918412
Help
Entry
123918412 CDS
T08949
Name
(RefSeq) putative DNA (cytosine-5)-methyltransferase CMT1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00270
Cysteine and methionine metabolism
tpra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
123918412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123918412
03032 DNA replication proteins [BR:
tpra03032
]
123918412
03036 Chromosome and associated proteins [BR:
tpra03036
]
123918412
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
tpra02048
]
123918412
Enzymes [BR:
tpra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
123918412
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
123918412
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
123918412
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
123918412
Prokaryotic defense system [BR:
tpra02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
123918412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
123918412
NCBI-ProteinID:
XP_045826415
LinkDB
All DBs
Position
LG3:3182657..3187549
Genome browser
AA seq
806 aa
AA seq
DB search
MAKKRVRKSSTSPNKRRRKSQEIVSLLPSERKNVKQSSPNLDAFFVGDPLPASEAQATWP
FRYSNPDGSSENAPLKAKFHYREGSVDGVVYQLNDTAYVKAEDGKPDYIARIVEFFETSD
NEPYFTAQWFYRAEDTVIKNHSGLVDNMRVFISDVKDDNPLDCILRKVNIAQVLPNVDLA
EKRKEIPSCDLYYDMKYTVPYLTFSNIDNENVKIESENNAEKSDWSLLDLYSGCGAMSTG
LCFGASISGIKLVTRWAVDMNKYACESLKLNHPETQVRNEAAEDFLNLLKEWEKLCNEFI
FKPLESAASDEKADDEEPETQSDSEEFEVERFISVCYGDPNEQKKPGLYFKVQWKGYDSN
YDTWEPIEGVSECKDAMRDFVTKGYKEKLLPLPGQADFICGGPPCQGVSGYNRFRNQKAP
LEDVKNKQLIVYMDIIDFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVSMNYQTRMGMM
AAGSFGLPQFRMRVFLWGALPNQNLPAYPLPTHEVVSRAVIPTEFEEITVAYAANENCKL
ANAVYLKDAIKDLPAVNNDESQDERNYGTTPITDFQKYIRAPSGKLYDHLPYKLNKDDYE
RVCKIPKTKGANFRDLPGVIVKGRKVEWDPAVERVLLTSGKPLIPDYAMSFVRGTSTKYV
YVHIICFLSSNFLVISIYIKFLMSLLKNDRPFGRLWWDEIVSTVVTRPEPHNQALLHPLQ
DRVLTIRENARLQGFPDCYQLCGTVKERYIQVGNAVAVPVALALGYTLGLAIQGLSDNKP
LMTLPFKYPSCLAQLLAIVKDDDSSL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaagcgcgtccgaaaatcttccacatcccctaacaaacgccgtcgcaaatca
caagaaatagtttctttacttccttctgaacggaagaatgtgaaacaatcatctcctaac
ctcgatgccttcttcgtcggagatccacttccggcgtccgaagcacaagcaacatggccc
ttccgttactcaaatccagatggttctagcgaaaacgctcccttaaaagcgaaatttcat
taccgtgaaggaagtgttgatggcgttgtttatcagcttaatgatactgcatatgtcaag
gctgaggatggtaaaccggattatattgcgagaattgttgagttctttgaaacttctgat
aacgaaccatattttactgcgcaatggttttatagagcggaagacactgtaattaagaat
cacagtggtttagttgacaatatgagggttttcatttctgacgtgaaagatgataatcct
ttggattgtatacttaggaaagttaacattgcgcaagtcttgcctaatgtggatttggct
gagaagagaaaggaaataccatcctgtgacctttattatgacatgaagtacactgttcct
tatttaacattttctaacattgacaatgaaaatgtcaaaatagaaagtgaaaataatgct
gagaagtcagactggagtttattggatttgtattctggctgtggagccatgtctacgggc
ctttgttttggagcttctatatctggcatcaaacttgtcacgaggtgggctgttgatatg
aataaatatgcctgtgaaagtttgaagctaaatcaccctgaaacacaggttagaaacgag
gctgcagaagactttttaaatcttctaaaagagtgggaaaagctctgcaatgagtttata
tttaaaccgttagaaagtgcagcttctgatgaaaaagctgatgatgaagagccagaaact
caatcggactctgaggagtttgaggtggaaaggtttatttcagtttgctatggcgatccc
aatgaacaaaagaaaccaggactgtactttaaagtgcaatggaagggctatgattccaat
tatgatacatgggagccaatagagggagtaagtgaatgtaaagatgccatgagagatttt
gttacaaaaggatataaggaaaagttattgcctcttcctggtcaagctgattttatttgt
gggggaccaccttgccaaggagttagcggatacaatcgcttcagaaaccaaaaagctccg
ttggaggatgtgaaaaataagcaactaattgtgtatatggatatcattgattttttgaag
ccgaagtatgtactgatggagaatgttgttgacattttgaaatttgccggtgggtttttg
ggccgctatgccgtaggccgtcttgtgtccatgaattatcaaactagaatgggaatgatg
gctgcagggtcgtttggccttccgcagtttcggatgcgtgtttttctttggggagctctt
cctaatcaaaatttgcctgcgtatccgttaccaactcatgaggttgtttcaagagctgtc
atacccaccgagtttgaagaaatcacagttgcttatgccgctaatgagaattgtaagctg
gctaatgcagtttatcttaaggatgcaataaaagatctccctgctgttaataatgatgag
agccaggatgaaaggaactatgggacaacccctattacagatttccaaaaatatataaga
gcaccaagtggaaagctgtatgatcatctcccgtataaattaaataaagatgactacgaa
agagtgtgcaaaattccaaagacaaagggggcaaactttagggacttacccggagtgatc
gttaaaggcagaaaagtggaatgggatcccgcagttgaaagagtcttgctaacatctggg
aagcctttgatacccgattatgccatgtcatttgttcgtgggacctcaactaagtatgta
tatgtgcacattatctgttttctatcatcaaattttctggttatttcaatctatatcaag
tttctcatgtccttgctgaaaaacgacaggccatttggtcgtttgtggtgggatgaaatt
gtgtctacagttgtaacaaggccagagcctcacaatcaggcccttctccacccactccaa
gacagagttcttaccattcgagagaatgcaaggttacagggatttccagattgctatcaa
ctttgtggcactgtcaaagagaggtacatacaagttggaaatgcagttgctgttcctgtt
gctcttgctctcggatacacgttaggattagctattcaaggactgtctgacaacaagcct
ttgatgactctcccattcaagtatccaagttgtcttgcccaacttttggctatagttaag
gatgatgattcaagcctctga
DBGET
integrated database retrieval system
