Trifolium pratense (red clover): 123919689
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Entry
123919689 CDS
T08949
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpra03016
]
123919689
Enzymes [BR:
tpra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
123919689
Transfer RNA biogenesis [BR:
tpra03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
123919689
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
MarB
Motif
Other DBs
NCBI-GeneID:
123919689
NCBI-ProteinID:
XP_045827632
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Position
LG4:10790843..10796814
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AA seq
690 aa
AA seq
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MEDIEDLLIGTGAGTPPGFRSPLTSATVGFETKKNQRSSLLSSPSPSIPGTQTIFIKTFG
CSHNQSDSEYMAGQLSAFGYSLSDNPDEADLWLINTCTVKSPSQSAMDTIITKGKSSNKP
LVVAGCVPQGSRDTKELEGISIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLPKV
RKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVSTVVVSYVVYSHSLSHTSAY
TLLHFPHLSLSLSHTHTHTHACARASTILFSSSHTHAHIISLSILLLILSVQVGRVKSVV
SDGVKEIWLSSEDTGAYGRDIGVNLPTLLNALVAELPADASTMLRIGMTNPPFILEHLKE
IAEVLRHPCVYTFLHVPVQSGSDAILTAMNREYTVSEFRTVVDTLTELVPGMQIATDIIC
GFPGETDEDFEQTVNLIREYKFSQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVF
EAFTPYSGMEGKVERIWITDIASDGVHLVGHTKGYIQVLVIAPDNMLGSSALAKITSVGR
WSVFGEIIETINHASDNKALNKQVPNQHMSSLCCNQTNTCVTSEVPESCACGNVDSCCSQ
STLETADNSRDTVVLPQKQNSKNLFGWILRKRKNLHKRVESELASGSDIKQEKSMKKWDF
VDKALLGGISISILTIIALLVYLRVSVIWS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaggacattgaagatttgctcatcggaaccggcgccggaactccaccgggctttcgt
tctccgttaacctccgctaccgttggctttgaaacgaagaagaatcaacgctcttcacta
ttatcttcaccttccccttcaatccccggcactcagactattttcataaagacatttgga
tgttctcataatcagagtgatagtgaatatatggctggtcagctttcagcttttggttac
tcattgagtgataatcctgatgaagcagatctatggctcataaacacttgcacagtaaaa
tccccgagtcaatctgccatggataccatcataacaaaaggaaaatcttcaaataaacca
ctagttgttgctggctgtgtccctcaaggtagtcgcgatacaaaagagctggaagggatc
agcattgtaggagtccagcaaattgaccgtgttgttgaagttgtagaggaaactttaaaa
ggtcacgaagtgcggcttttgacccgtaagacattgccagcactcgaccttccaaaggtg
agaaagaacaaatttgttgagattcttccaattaatgtcggatgtttaggtgcttgcact
tattgcaagacaaaacatgctcggggtcaccttgggagttacacaatagatagccttgta
agtactgtagtagtgagctatgttgtatactctcactccctctcacacacatctgcatac
acactattacattttcctcacctctctctctctctctctcacacacacacacacacacat
gcgtgcgcgcgtgcatctactattttattttcctcatctcacacacatgcacacattatt
tcactttccatacttctattaatcctctctgtgcaggttgggcgtgtaaagtctgtggta
tctgatggagttaaagaaatatggctgagtagtgaagataccggagcatatggtcgcgac
attggtgtcaatcttccaactttattaaatgccttagtagcagaattaccagctgatgca
agcactatgctgcgtattggaatgaccaatccaccttttatccttgagcacttgaaagag
atagcagaggttctacggcatccatgtgtttacacctttttgcatgtgccagttcagtct
ggaagtgatgctattttgactgcaatgaatcgagaatatactgtgagtgagttcaggact
gttgtagataccttaactgagcttgtaccagggatgcagattgccactgatataatatgt
ggatttccaggtgaaaccgatgaagattttgagcaaactgtcaaccttataagagaatac
aaattctctcaagttcatatttcacaattttatcctcgaccaggcacacctgcggctagg
atgaaaaaggttccaagtaatgtggtgaagagaagaagccgtgaactgacgaatgtcttt
gaagccttcacgccatactctgggatggaaggcaaagtggaaagaatttggattactgat
attgcatctgatggagtgcacttggttggtcatacaaaaggatatatacaagttctcgta
attgctccagacaatatgcttggaagttcagctctggccaagataacatcggtcggaaga
tggtcggtttttggggaaataattgagacaataaatcatgcaagtgacaataaagctttg
aacaagcaggttcctaatcagcatatgtcttctctctgttgtaaccaaaccaacacttgt
gtaacctcggaagtgccagaatcttgtgcttgtggaaatgttgacagctgctgcagtcag
agtactctcgagacggccgataattcaagagatactgtagtgctgccacagaagcaaaac
agcaaaaatttgtttggatggatactaaggaagcgaaagaatctgcacaaaagggttgaa
agtgaacttgcctcaggatctgatataaagcaagaaaagagcatgaaaaagtgggacttt
gttgataaggctcttttgggtggaatctctatcagcatcttgacaattattgctttatta
gtttatcttagggttagtgttatttggtcctaa
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