Trifolium pratense (red clover): 123919791
Help
Entry
123919791 CDS
T08949
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00900
Terpenoid backbone biosynthesis
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
Module
tpra_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
123919791
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tpra01006
]
123919791
Enzymes [BR:
tpra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
123919791
Prenyltransferases [BR:
tpra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
123919791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Cap4_nuclease
Motif
Other DBs
NCBI-GeneID:
123919791
NCBI-ProteinID:
XP_045827749
LinkDB
All DBs
Position
LG4:complement(46322382..46330644)
Genome browser
AA seq
416 aa
AA seq
DB search
MLFSRISRNLRTTFNGCRWYLSLPEHNRRFLFSQSPRDSTQHVVRSFIFSKGIPALYSSR
YQIHQHSSSLVEDELDPFSLVADELSHIGNKLREMVVAEVPKLASAAEYFFKMGVEGKRF
RPTVLLLMSTALNLPIPKAPPPMEHGGTTSSDLRSRQQRIAEITEMIHVASLLHDDVLDD
ADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVTLASLKNTEVVSLLAKVVEHLVTGETMQ
MTTTSDQRCSMEYYMEKTYYKTASLISNSCKAIAILAGQTAEVAVLAFEYGKNLGLAFQL
IDDVLDFTGTSASLGKGSLSDIQHGIVTAPILFAMEEFPQLRAIVEEGFENPENVNIALD
YLGKSRGIQKTKELAVKHANLAAEAIDSLPESDDEEVRKSRKALVELTQIVITRTK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctattttcacgaatttctagaaaccttagaactaccttcaatggatgtcgctggtat
ctgtctcttccagaacacaaccgtcggtttctattctctcagtcacctagagattctact
caacatgttgtgagaagttttattttttcaaagggcattccagcattgtatagtagtaga
tatcaaattcatcagcacagcagctccctagtcgaggatgaacttgatccgttttcactg
gtggctgatgaactatcacatattggtaacaagctgcgagaaatggtagtggctgaggtt
cctaagcttgcctcagctgctgagtacttcttcaaaatgggggtggaaggaaaaagattt
cgtcccacggttttgttgttaatgtcaacagcattaaatctaccaattcccaaagcacct
cctccaatggaacatggaggtactacatcatctgacctacgctcaagacaacaacgcata
gctgaaataacagagatgatccatgtggcaagccttcttcatgatgatgtattggatgat
gccgatactagacgtggtattggttcattgaattttgtaatgggaaataagttggcggta
ttggctggagattttttgctttcccgagcttgtgttactctggcctctttaaagaacact
gaggttgtatctttgttggcaaaagttgtagaacatcttgtaacgggggagaccatgcaa
atgactacaacatctgatcaacggtgtagcatggagtattatatggaaaagacatactac
aagactgcatcattaatatcaaacagttgcaaggcaatagccatccttgcagggcaaaca
gctgaagttgcagtgcttgcatttgagtacggaaaaaatctgggtttggcatttcaattg
atagatgatgtacttgatttcacaggcacatcagcttcccttggaaagggttctttatca
gacattcaacatggaattgttacagctccaatattgtttgcaatggaggagttccctcag
ttgcgcgcaattgttgaagagggctttgaaaaccctgagaacgtcaatattgctctggat
tatcttgggaagagccgaggtatacaaaaaacgaaggagctagccgtgaagcatgctaac
cttgcagcagaagcaattgattccttacctgaaagtgatgatgaagaagtaagaaaatca
aggaaagcccttgtagaacttactcagatagtcattacaagaacaaaatga
DBGET
integrated database retrieval system
