Trifolium pratense (red clover): 123920834
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Entry
123920834 CDS
T08949
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00906
Carotenoid biosynthesis
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
Module
tpra_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
123920834
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tpra01006
]
123920834
Enzymes [BR:
tpra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
123920834
Prenyltransferases [BR:
tpra01006
]
Terpene biosynthesis
Squalene/phytoene synthase
123920834
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
123920834
NCBI-ProteinID:
XP_045829116
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All DBs
Position
LG4:complement(35825042..35829494)
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AA seq
434 aa
AA seq
DB search
MSLTLLRVASSPNLEVSNSNGLLDSFGVKKLVDSSKFLSRDFVSIRAKKNDKKKSRRFCS
LSTDVKYACVGQSGLESSSNFPLVSNVLASTAVGEVAISSEQKVYDVVLKQASLVKRKLS
STGELEVKPEIVLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWC
RRTDELVDGPNASHITATAMDRWESRLDELFQGRPFDMLDAALSDTVAKFPVDIQPFKDM
IEGMRMDLKKSRYKTFDELYLYCYYVAGTVGLMSVPVMGISTLSQAPTESVYNAALALGI
ANQLTNILRDVGEDARRGRVYLPQDELALAGLSDDDIFAGKVTDKWRNFMKSQIKRARMF
FDEAEKGVTELNEQSRWPVWASLLLYRQILDEIEANDYNNFTKRAYVSKTKKLLSLPLAY
ARSMVPPTRKLSHA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgacattattaagggttgcttcctcacctaacttagaggtctcgaattccaat
ggtttactcgattctttcggggttaagaagctcgtagattcttcgaagttcttatctaga
gactttgtgtcaattagagcaaaaaagaatgataagaaaaagagtaggagattttgcagc
ttgagtacagatgtgaaatatgcatgtgttggtcagtctggtttagagagttctagtaac
ttccctttagtatccaacgtgctcgcaagcactgcagtaggagaagtggctatttcgtct
gagcagaaggtctatgatgtggtgttgaagcaggcgtcgttggttaagaggaagctgagc
tctaccggtgagcttgaggtcaaaccggaaattgttttgcccgggaatttgagcttgttg
agtgaggcctatgatcgttgtggagaaatttgcgcagaatatgctaaaacattttacttg
ggtactcttctaatgactccagaaaggcgaagagcgatctgggctatatatgtgtggtgt
aggaggacggatgaacttgtcgatggccctaatgcttcacatattacagcaactgctatg
gataggtgggaatcaagattggatgaacttttccaaggacgtccatttgatatgcttgat
gctgctttatcagatacggttgccaaatttcctgttgatatccagccatttaaagatatg
atagaaggaatgagaatggatctaaagaaatcaagatacaaaacctttgacgaattatat
ctttattgttactatgttgctggaactgttggtttgatgagtgttccagtaatgggaatt
tcaacgctttcacaagccccaacagaaagtgtatacaatgctgccttggccttaggaatt
gcaaatcagctaaccaacatactcagagatgtcggagaagatgcaaggagaggaagagtg
tatctaccacaagatgagttggctctggcagggctttcagatgatgacatatttgccggt
aaggtgactgacaagtggaggaacttcatgaagagtcaaataaaaagggcgagaatgttt
ttcgatgaggcagaaaagggagtgacggagcttaatgaacagagcagatggccggtgtgg
gcgtctctgctattatatcgacaaatattggacgaaatagaagctaatgattacaataat
ttcactaagagggcttatgtgagcaaaacaaagaagttactttctttaccacttgcatat
gctaggtctatggttcctccaacaagaaagttatctcatgcatag
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