Trifolium pratense (red clover): 123922250
Help
Entry
123922250 CDS
T08949
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00040
Pentose and glucuronate interconversions
tpra01100
Metabolic pathways
Module
tpra_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123922250
Enzymes [BR:
tpra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
123922250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
123922250
NCBI-ProteinID:
XP_045830940
LinkDB
All DBs
Position
LG4:complement(20491663..20493644)
Genome browser
AA seq
422 aa
AA seq
DB search
MAIAKSATILILFFALANYVNAGDISRVRPPVGQDIFGGRNHAKDVLLPGEKIVNVLSFG
AKGDGVTDCTQAFMSTWQAVCKQQGQNRFYVPPGRYLVSSMFFMGPCLAPHPVTIQVEGT
VLASTDISEFENSEWLMFEHINGLKIIGGGTFDGQGQDSWKYTENCETSNQACARNPSSL
FFAEVQNVIISNIKSLNPKGFHIFVTKSSNVRLRRLKLIAPETSPNTDGIHISSSVNVIV
ARNTIQTGDDCISMIQGSENVFINRLRCGPGHGISIGSLGKYPNEREVKGISIKNSQLIG
TTNGLRIKTWPDKYGGGASEISFSNINMTNVKNPIIIDQEYECDDVCKKKPSLVRIADIH
FANVRGTTISPIAVDMRCSKTYPCMGVTIRDIDLKFGNAPSQARCVNVKPIYGGMQNPPA
CP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggccattgcaaagagtgctactattcttattttgttctttgcattggccaattatgtg
aatgctggggatatctcaagagtaaggccacccgttggccaagatattttcgggggtaga
aatcacgctaaggatgtcctccttccaggagaaaaaatagttaatgtcttgagttttggc
gccaaaggcgatggcgtgactgattgcactcaggctttcatgtcgacatggcaagcagtc
tgcaaacaacagggacaaaatcggttttatgttcctcctggtagatatttggtttcttca
atgttttttatgggaccatgtcttgccccacatccagtaacaattcaagtggaagggaca
gttttggcttctaccgatatttcggagttcgaaaactcagaatggctcatgtttgaacat
attaatggcctaaaaatcattggtggaggtacttttgatggacagggtcaagactcatgg
aaatatactgagaattgtgaaactagcaatcaagcatgtgcaagaaaccccagtagtttg
tttttcgcggaagtccaaaatgtaattataagtaacattaaatcactgaatcccaaaggc
tttcacatattcgttactaaatcttcaaacgttaggttgcgtagacttaaactcattgca
cctgaaactagtcccaacactgatggcattcatattagtagctcagtcaatgtgattgta
gctagaaataccattcaaaccggagacgattgtatctctatgatacaaggttctgaaaat
gttttcatcaacagactcagatgtggacctggacacggtatcagtattggtagtctcgga
aagtatccaaatgagcgagaggtgaaaggtattagtataaagaacagtcaattgatcggc
acaaccaatggtttgagaattaaaacatggccagacaaatatggaggcggagcatcggag
ataagtttcagtaacattaacatgacaaatgttaaaaatccaatcattatcgaccaagag
tatgaatgcgatgatgtctgcaaaaagaagccatcactggtgaggatagcagatattcat
tttgcaaatgtaaggggaactacaatttcaccaattgcagttgatatgaggtgcagcaag
acatatccatgcatgggagttaccattcgcgatatcgacctgaagtttggaaatgcacct
tcacaagctagatgtgttaatgttaagcctatctatggtggcatgcaaaacccaccagct
tgcccataa
DBGET
integrated database retrieval system
