Trifolium pratense (red clover): 123924192
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Entry
123924192 CDS
T08949
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123924192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123924192
Enzymes [BR:
tpra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123924192
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
123924192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
123924192
NCBI-ProteinID:
XP_045832954
LinkDB
All DBs
Position
LG4:complement(18371798..18399208)
Genome browser
AA seq
1402 aa
AA seq
DB search
MNKPRNDAVIFTKEPFIEDTGPSKIAGISFSTLSEAEISKMGEVQVSKTSYYDSFRKADP
GGLLDPHMGPANKGTNIPCATCHGNFSDCQGHFGCFQLDQPVFNVGYLNTIVKILKCICK
RCARVLLDENERKMHLAKMRNPKLDGQQKLHALEAATKNFKNPNAIQCPRCGYMNGKVKY
NKPNLSIVHDLSVAKNEDVAELESSVSHINNYRSCKEVYKRTLNPHMVLDLFKKMHREDC
VLLYLAENPENLIMKNIAVPPIAIRPSVMVDGAQSNENDITEKLKKIIQTNALIQDVSVE
PGKYEGNYVMLQFEAAQYINSEVKTYNLQPSKPLTGFIQRIKGKQGRFRSNLSGKRAEYT
GRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVKNGPDKYPGAKVVKNA
GGESWTLKVNRTKHADELKFGDIVERHLEDGDIVLFNRQPSLHRMSMMCHRARVMPWRTL
RFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFL
TSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHA
NVRVYVNLTVKEKTHKTKKDDRNRVVKTLCPYDGFVYFRNSELISGQLGKATLGNGNKDG
LFSVLLRDYKSDAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKQTLINNKVKIINGGYN
ECDGFIEAFNERKLQPAPGCDAAQTLESMIFSKLNGLRDKIAEVCMQTLHWRNSPLIMSQ
CGSKGSPINICQMVACVGQQSVGGCRAANGFIDRSLPHFRKKAQTPDDKGFVRDSFFDGL
SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIVQFCY
GDDGMDPAGMEGKNGKPLNFDRLFLRSKAICPSDGDDVILSSSDMRKILHEKLSEVGVSK
LEEKDTSGNDIMLEAGFSADFIKSLQSFVEENTKLTETITEDDPKHLKNLNNFIPRISGI
SRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLG
VPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSA
ALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKILDRKKLQVDAKVDPKAAN
QSEVIFQLNNLKNLLPSVVVKGVKTAERVVLEVGNKDEKVKKFNLLVEGKGLKEVIGIEG
VDGHKTVSNHVTEMNNVLGIEAARDCIIGQIQYTMKEHGMTIDVRHIMLLADMMTVRGQI
LGMTRHGIVKMGRSTLMLASFESSTDYLFDASLRGMSDPIEGVSDCIIMGKPIQIGTGMI
EIKQRLDPPVLPRGAVPILSQV
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaccgagaaacgatgctgtgatcttcacgaaggagcctttcatcgaggataca
ggaccaagcaaaatagctggtatttcgttttccacgctatctgaagcagaaatcagcaaa
atgggtgaagttcaagtgtcgaaaaccagttactatgattcatttcgaaaggctgatcct
ggtggcttgttggatcctcacatgggccctgctaataagggtactaatattccttgtgca
acatgccacgggaacttttctgactgtcaagggcactttggatgcttccaacttgatcaa
cctgttttcaatgtcggatacttaaatacaattgtgaaaatactgaagtgcatttgcaag
cgatgtgctcgtgttctccttgatgaaaatgaacgtaaaatgcatttggcgaaaatgaga
aaccctaaattggatgggcagcagaagttgcatgcgcttgaagctgcaacgaaaaatttt
aaaaatcccaatgctatacagtgcccaagatgtggatatatgaatggtaaagtgaagtac
aataagccaaacctgagcattgttcatgacctctcagttgctaagaatgaagatgtcgca
gagctcgaatcatctgtttctcatataaacaattataggtcatgcaaggaagtttataaa
cgaactcttaaccctcacatggttcttgacttgtttaaaaagatgcaccgtgaggactgt
gtattactttatcttgccgaaaacccagagaatctcatcatgaaaaacattgctgtgcca
cctatagctattcgaccttcagtcatggtggatggagcacagagtaatgaaaatgacata
acagagaagctaaagaaaataatccagacaaatgctctcatacaagatgtatcagttgag
ccaggcaaatatgagggtaattatgttatgcttcaatttgaggctgctcaatacataaat
agtgaagttaaaacatacaatctacaaccgagcaagcctttaaccggttttattcagcgc
attaaagggaagcaaggtcgtttccgtagcaatctgtctggaaaacgtgctgaatatact
ggcaggacagttatttcacccgatcctaatctaaagattactgaggttgcaataccgatt
catatggctcgcattttgacttatcctgagcgtgttacacatcacaacatagagaagttg
agacaatgtgtgaaaaatggtcctgataagtatcctggtgcaaaggtggttaaaaatgct
ggaggtgaatcatggactttaaaagttaatcgtacgaagcatgctgatgaactgaaattt
ggtgatattgtcgaacgccatttagaagacggagacattgttcttttcaacaggcaacca
agcttgcatcggatgtctatgatgtgtcatagggcaagggttatgccttggagaactttg
agatttaatgaatctgtatgtaatccatataatgctgattttgatggtgatgagatgaac
ctacatgttccacagactgaggaggcacgaacagaggctcttttgttgatgacggtgcaa
aacaatttgtgcacaccaaaaaacggggaaattctagttgcctctacacaagacttctta
acctcttcctttctcataactaggaaagatactttttatgaccgttcaacattttcactt
atttgctcatacatgggggacggcatggatcctattgatttgccaactcctgcaattatt
aagccagttgaactctggagtggcaaacagttatttagcattttattgcgcccacatgca
aatgtgagggtctatgtgaacctcactgtaaaggagaaaacacacaagacaaagaaggat
gacaggaatagagtggtgaaaacattgtgcccttatgatggatttgtttattttcgcaac
agtgagctaatctctggacaacttggaaaggcgactttaggaaatggcaataaggatgga
cttttctctgtgttactaagagactataaatcagatgctgctgcttcttgcatgaatcgt
cttgctaaattaagtgctaggtggataggtaatcatgggttctcgataggcattgatgac
gtccaacctaaacagacactgatcaataataaggtcaaaataattaatggtggttacaat
gagtgtgatggttttatagaagctttcaatgaaagaaagctacaacctgcacctggttgt
gatgctgctcaaacattagagtctatgatatttagtaagttgaatggcttgcgtgataag
atagcggaggtttgcatgcaaacattacactggagaaatagtccattgatcatgtcacaa
tgtggttccaaaggatctcctatcaatatctgtcaaatggttgcctgtgttggtcaacag
tcagttggaggttgtcgtgctgctaatgggttcatagatcggagtcttcctcatttccgt
aaaaaagcgcaaacccctgatgataaaggttttgttagggattcctttttcgatggattg
tcagctactgagtttttcttccatacaatgggagggagagaagggctcgttgataccgcg
gtcaaaactgcagacactggatatatgtcccgtagattaatgaaagctctagaggacttg
tttttacattatgattacactgtaagagataccaatggtggtatagttcagttttgttat
ggagatgatggcatggatccagcaggcatggaaggaaaaaatggaaaaccattaaatttt
gatcggttatttctcagaagcaaggccatatgtcctagtgatggagatgatgtaatctta
tcttcttcagatatgcggaaaatacttcacgagaagctttcagaagttggtgtgtccaag
ttagaggagaaggatacttcaggaaatgatataatgttagaggcgggattctctgctgat
tttataaaatcgctacaatcatttgtcgaagaaaatacaaaactaacagaaactattacc
gaggacgatcctaaacatctgaagaacctgaataactttattccaaggatatccgggatc
agtcgcagacaactagaggtttttctggatatttgtctatcacgttaccgtttcaaaaaa
attgaggctggaactccaattggtgcaattggagctcatagtattggagaacctgggact
cagatgactttgaaaacttttcactttgctggggttgcaagcatgaatgttactcttgga
gttcctcgcatcatggaaattataaatggagcatcaaatattaagacaccgatcatcact
gcgatacttgagactgatgataatataaatattgcaaggatggtgaaaggtcgcatagaa
aaaacaactttaggccaggttgcaaagagtatcaaggttgttgccacttcaagatcagcg
gcactttttatctcactggacgagaagataatcgaagaggcatatctgaatatagattct
aatactgtaaaagaatcaattttgcaaactggaaaactgaagttgaaggaaaaggaaatt
aagattttggatcgtaaaaagcttcaagtggatgccaaagtggatcccaaagctgctaac
caaagtgaagtcatttttcaacttaataatctcaaaaatttgcttccatcagttgtagta
aagggtgttaaaactgccgaacgagttgtcctcgaagtaggtaataaagatgaaaaagtt
aagaagttcaacttactggtggaaggcaagggccttaaagaggttataggaattgaaggg
gttgatggacataaaactgtcagtaatcatgtcactgaaatgaataacgttctgggaatt
gaagctgccagagattgtatcattggacagattcagtatacaatgaaagaacatggaatg
actatagacgtacgccatattatgcttctagcagatatgatgactgtcaggggccaaatc
cttggaatgacaagacatggaatagtgaagatgggcagaagtacattgatgcttgcatca
tttgagagttcaacagactatctttttgatgcatccttgcgtgggatgagtgacccaatt
gaaggagtgagtgattgcataataatgggtaaaccaattcagataggcaccggaatgatc
gagatcaaacaaaggttggatcctccggtgttgcctcgaggagctgttcctattctatct
caagtttga
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