Trichogramma pretiosum: 106658585
Help
Entry
106658585 CDS
T07644
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03020
RNA polymerase
tpre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106658585
09124 Replication and repair
03420 Nucleotide excision repair
106658585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpre03021
]
106658585
03400 DNA repair and recombination proteins [BR:
tpre03400
]
106658585
Enzymes [BR:
tpre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106658585
Transcription machinery [BR:
tpre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106658585
DNA repair and recombination proteins [BR:
tpre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106658585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106658585
NCBI-ProteinID:
XP_014236076
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MYADEDGEIEGADEEISSRVWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVEE
SPAIEIEAETQYLDGQLDAAGCKHLVKFEQIYLSKPTHWEKDGAPAPMMPNEARLRNLTY
AAPLYVDVTKSVVKKEPDEGTAAETQHQKTVIGKIPIMLRSKYCFLAGLSDRDLTELNEC
PLDPGGYFIINGSEKVLIAQEKMATNTVFVFGIRSGKYAYKTEIRSCLEHSSRPVSTLWI
NMMSKSSSSMKKSVVGQRIVAILPYIREEIPIMIAFRALGFVADRDILEHIIYEFDDLEM
TEMLKASLDEAFVIQEQDVALNFIGTRGTKPGVPKTKRIKYAKEILQKETLPHVGCSDYC
ETKKAYFLGYMVHRLLVAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKTLTKEVKM
YAKKFVDRGKDFNLELAIKTKTITDGLRYSLATGNWGDQKKAHLARAGVSQVLNRLTFTS
TLSHLRRVNSPIGRDGKLARPRQLHNTLWGMLCPAETPEGQAVGLVKNLALMAYISVGSQ
PLPILEFLEEWSMENLEEIAPSVIAEASKIFVNGCWVGIHRDPEQLMTTLRKLRRQMDVI
VSEVSITRDIRDREIRIHTDAGRISRPLLIVENQKLLLKKYHINMLKKFEYRCDGWQELV
SSGVVEYIDCLEEETAMIAMSPEDLRQERSYAYCTSHTHCEIHPAMILGVCASIIPFPDH
NQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGI
NSIVAILCYTGYNQEDSIILNASAVERGFFRSVFYRSYKDSEAKRMADQEEQFERPDRQS
CQGMRNAIYDKLDDDGIISPGLRVSGDDVIIGKTMMLASDDDELESSMKRYTKRDASTFL
RNSETGIVDQVMLTLDNDGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGILYRQEDMPF
TSEGITPDVIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISSLLM
EYGYQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPLE
GRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNYCGLIAIANLRNNTFE
CKGCRNKTQISQVRLPYAAKLLFQELMSMNIAPRLMTQ
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagacgaggacggcgagatcgaaggcgccgacgaggagatatcgtcgcgggtc
tggcaggaggcctgctggatcgtgatcaacgcctacttcgacgagaagggcctggtgcgc
cagcagctcgacagcttcgacgagttcatcgagatgtccgtgcagaggatcgtcgaggag
tcgccggccatcgagatcgaggccgagacgcagtacctggacggccagctggacgcggcc
ggctgcaagcacctggtcaagttcgagcagatctacctgtcgaagccgacgcactgggag
aaggacggggccccggcgccgatgatgcccaacgaggcgagactgcggaatctgacctac
gccgcgccgctctacgtcgacgtcaccaagagcgtcgtgaagaaggagcccgacgaagga
accgccgccgaaacgcagcatcagaagacggtcattggcaagattccaataatgctgcgc
tccaaatattgctttctcgccggtctatcggaccgcgatctcaccgagctcaacgagtgc
cccctcgatcccggcggttacttcattatcaatggatcggaaaaggtgctgatagcgcaa
gagaaaatggcaaccaacacggtattcgtgttcggaatccgaagcggcaagtacgcctac
aagactgaaatacgatcgtgcttggagcacagctcgcgtccggtatcgactttatggatc
aatatgatgtccaagagcagctcgtcgatgaagaaatcggtcgtcggtcagcgcatcgtc
gcgatcctaccctacatccgcgaggagatacccatcatgatcgcgttccgcgcgctgggc
ttcgtcgcggatcgcgacatactcgagcacatcatctacgagttcgacgatctcgagatg
acggagatgctgaaagcctcgctcgacgaggccttcgtcattcaggagcaggacgtggcg
cttaatttcatcgggacgaggggcaccaagccgggcgtgcccaagaccaagaggatcaag
tacgccaaggagatactgcagaaggagacactgccgcacgtcggctgcagcgactactgc
gagaccaagaaggcctactttctcggctacatggtgcacaggctgctcgtcgcggcgctc
ggtcgccgcgaattagacgatcgagaccactacggaaacaagcgactggacttggccggg
cctctgctggcctttctatttcgcggactgttcaaaaccctcacgaaggaggtgaagatg
tacgcgaaaaagttcgtcgacaggggcaaggacttcaatttggagctggcgatcaagacc
aaaacgatcaccgacggcctgaggtactctttggccaccggcaactggggcgatcaaaag
aaagctcatctggccagagctggagtttctcaagttttaaatagattgacgttcacctcg
accctgtcgcacttgaggcgagtcaattcgccgatcggccgggacggcaaactggcgcgg
ccgcgacagctgcacaacaccctgtggggcatgctgtgcccggcggagacgcccgagggc
caggccgtcggcctcgtcaagaatctcgccctcatggcctacataagcgtcggctcgcag
cccctgcctattctcgagtttctcgaggagtggtccatggagaatctcgaggagatagcg
ccgagcgtcatcgccgaggccagcaagatcttcgtcaacggctgctgggtgggcatacat
cgcgatcccgagcagctcatgacgactctcagaaagctcagaaggcaaatggacgtgatc
gtatcggaagtatcgataactcgggacatcagagatcgagagatcagaattcacacggac
gctggaagaatcagtcggcctctgttaatcgtagaaaatcagaaattgctacttaaaaag
taccacataaacatgctgaagaaattcgagtacagatgcgatgggtggcaggaactggtg
agcagcggcgtcgtcgagtatatcgactgcctcgaggaggagacggcgatgatcgccatg
tcgccggaggacctgagacaggagagatcgtacgcctactgcacgagccacacgcactgc
gagatccatccggccatgattctgggcgtctgcgcctccatcattcctttccccgatcac
aatcagagtcctcgcaatacctatcagagcgccatgggcaaacaggcgatgggcgtgtac
ataacgaatttccacgtgcgcatggacaccctggcccacgttctctactaccctcacaag
cccctcgtgaccacgaggtccatggagtaccttcgatttcgcgagctgcccgccggcatc
aacagcatcgtcgcgatcctctgctacacgggctacaatcaggaggacagcatcattctg
aacgcgagcgcggtcgagcgcggcttcttccgctccgtcttctatcgctcgtacaaggac
tcggaggcgaagcgaatggccgatcaggaggagcagttcgagaggccggatcggcagagc
tgtcagggcatgaggaacgccatttacgacaagctcgacgacgacggcatcatatcgccc
ggattgagggtctccggggacgacgtcatcatcggcaagaccatgatgttggcctcggac
gacgacgagttggaaagctcgatgaagcgctacaccaagagagacgcctcgacttttctg
cgcaacagcgaaaccggcatagtcgaccaagtcatgctgaccctcgacaacgacggatat
aaattttgcaagattcgcgtgcgcagcgtccgaatcccccaaatcggcgacaagttcgcc
tctcgacacggtcaaaaaggaacatgcggaatactctaccgccaggaggacatgccgttc
acgagcgagggcataactccggacgtgatcatcaatccgcacgccataccgtcgcgcatg
acgatcggccatctgatcgagtgcatccagggcaaggtgtcggccaacaagggcgagatc
ggcgacgccacgcccttcaacgacgccgtcaacgtccagaagatctcgagcctgctcatg
gagtacggctaccagctgcgcggcaacgaggtcatgtacaacggccacaccggccgcaag
atcaacgcccaggtgttcctgggcccgacctactatcagaggctcaagcacatggtcgac
gacaagatacacagcagagccagaggacccgtacagattctcgtcaggcagcctctcgag
ggcagagcgagggacggaggcctgcgtttcggagagatggagcgcgactgtcagatcagc
cacggtgcggcgcaatttttgcgagaacgactcttcgaggtctcggacccttacagaata
cacgtgtgcaattactgcggactcatcgccatagccaatctcagaaataataccttcgag
tgcaagggttgtagaaataagacgcaaatatcccaagtcagattgccctacgccgccaag
cttttgttccaagagctcatgtccatgaacatagcgcctcgactcatgacgcaatga
DBGET
integrated database retrieval system
