Thermococcus profundus: A3L09_02965
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Entry
A3L09_02965 CDS
T05153
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tprf
Thermococcus profundus
Pathway
tprf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tprf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A3L09_02965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tprf03021
]
A3L09_02965
Enzymes [BR:
tprf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A3L09_02965
Transcription machinery [BR:
tprf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
A3L09_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
ASJ02293
UniProt:
A0A2Z2MA48
LinkDB
All DBs
Position
530995..533718
Genome browser
AA seq
907 aa
AA seq
DB search
MQSMKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVIDPGLRC
ETCGARAGECPGHFGHIELARPVIHVGFAKTIHRVMESTCRECGRIKLTDEEIEEYMHKF
EVVGDRKKAKDRLIKEIHKKAKERMICPHCGAPQFPLKFERPTVYYELRKDEEGNEYKHR
MMPSEIRDRLERIPDKDLPLLGLHPEKSRPEWMILTVLPVPPVTMRPSITLESGIRAEDD
LTHKLVDIIRINNRLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGVPPAKHKSGRP
LKTLAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPLAVAMELTVPEKVT
EFNYEKLRQRVLNGPEKYPGANYVIDPEGRRIRLMETNLEMIAEKLDIGWTVERHLEDGD
IVLFNRQPSLHRMSIMAHRVRVMPYRTFRLNLPVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPLIAGIQDHISGGYLLTREGAYFTRMEVEVMLTFAGVDVDEL
PAPDKFENGEPLWSGKTVFSLLLPEDLTIWYRNKLCDEPERCEAIEKLIEEKLVPDPEEV
RKIAYDGFVYIQNGKLLSGAIDKKAYGREDGKLLDLIVREYGVDRARQFLDQVTKLTIWV
ITHKGFTTAIDDEDLPSEALDRIHEIIREAEERVNRLIEAYKNGELEPLPGKTLEETLES
KIMAVLAEARDNAGKVAERYLGMTNHAVIMAKTGARGKILNITQMAAMLGQQSIRGKRLY
RGYRGRVLTHFKPGDLGAKARGFVTNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGIIVQFKYGEDGIDPMKSWGGKTLDVDRVIIRNLVK
MRGGGRR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgatgaagaaggttatcggtagtatcgagttcggaatcctctcacctcaggaa
atcaggaagatgagcgcggccgagataaccgttccagatacctacgacgatgacggttac
ccaatcgagggcgggctgatggacaagaggctcggtgtcatcgacccgggtcttcgctgt
gagacctgcggtgccagggccggggagtgtcccggccacttcggtcacatcgagctcgcc
agacctgttatccacgtcggctttgcgaagaccatccaccgcgttatggagagcacctgc
cgcgagtgcggaaggataaagctcaccgatgaggagatagaggagtacatgcacaagttc
gaggttgtgggagacaggaagaaggccaaggacaggctcatcaaggagatccacaagaag
gccaaggagagaatgatatgcccgcactgtggagcacctcagttcccgctcaagttcgag
aggcccaccgtttactatgagctcagaaaggacgaggaggggaacgagtacaagcacagg
atgatgccgagcgagataagggacaggcttgagaggatccccgataaggaccttccactc
ctcggccttcaccctgaaaagtccaggcccgagtggatgatcctcacggtccttccagtc
ccacccgttaccatgaggccttccatcaccctcgaaagcggcatccgcgccgaggacgac
ctcacccacaagctcgttgacataatccgtatcaacaaccgtctcaaatccaacatcgag
gccggtgcaccacagctcatcatcgaagacctctgggatctccttcagtaccatgtgact
acctacatcaacaacgagacctcgggggttcctccggcgaagcacaagagcggaaggccc
cttaagaccctcgcccagcgtctcaagggtaaggaaggcaggtttagagggaacctcagc
ggtaagcgtgtcaacttctcggcaagaaccgtcataagccccgacccgatgataagcatc
aacgaggtcggcgttccgctcgcggtcgcgatggagctcaccgttccagagaaggtcacc
gagttcaactacgagaagctaaggcagagggttctcaacgggcctgagaagtacccaggg
gccaactacgtcatcgatcccgaggggagaaggatccgcctcatggagaccaacctcgag
atgatagcggagaagctcgatataggctggaccgtcgagaggcaccttgaggatggggat
atcgtcctcttcaaccgtcagccttcccttcacaggatgtccatcatggcccaccgcgtt
cgcgttatgccctacaggaccttccgcctcaacctgcctgtctgtccgccgtacaacgcg
gacttcgatggagatgagatgaaccttcacgtgccccagaccgaggaggcgcaggctgag
gctaagatccttatggaagtccagaaccacatcatctccccgaggtacggtggcccgctc
atagccggaatccaggatcacatctccggcggctacctgctaacaagggagggggcgtac
ttcacgaggatggaagttgaggtgatgctgaccttcgcgggagttgacgttgatgaactc
ccagcccctgacaagttcgagaacggcgagcccctctggagcggcaagaccgttttctcg
ctcctccttccggaggaccttacgatatggtaccgcaacaagctctgcgacgagccggag
cgctgtgaggccatcgagaagctcatagaggagaagcttgttccggatccggaggaagtc
agaaagatagcctacgacggcttcgtatacatccagaacggaaagctcctcagcggtgcc
attgacaagaaggcctacggaagggaggacggaaagcttctcgacctcatagtcagggag
tacggtgtcgacagggccaggcagttccttgaccaggtcacgaagctgaccatctgggtg
ataacccacaagggcttcacgaccgccatagacgatgaggatctcccgagcgaggccctc
gacaggatacacgagataatacgcgaggctgaggagagggtcaacaggctcatcgaggcc
tacaagaacggggagcttgagcccctcccgggtaagacccttgaggagacccttgagagc
aagatcatggcagttctggctgaggcgcgtgacaacgccggtaaggtcgccgagcgctac
ctcggtatgaccaaccatgcggtcatcatggccaagactggagcgagaggtaagatactc
aacatcacccagatggccgcgatgctcggtcagcagtcaatccgcgggaagcgcctctac
cgcggctaccgcggaagggttctcacccacttcaagccgggtgatttgggggccaaggcg
aggggtttcgttacgaactcctacaagagcggtctgacgccgcaggagtacttcttccat
gcgatgggtggtagggaaggtctcgtcgataccgccgttagaactgcccagagcggttac
atgcagagaagattaatcaacgcccttcaggatctcaaagtagactacgacggaacagtc
agggatccaacgggaataatcgtccagttcaagtacggtgaggacggcatcgatccgatg
aagagctggggcggcaaaacgctcgacgtcgacagggtgatcatcaggaacctcgtgaag
atgcgcggtggagggaggaggtga
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