Salipiger profundus: Ga0080559_TMP4208
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Entry
Ga0080559_TMP4208 CDS
T04656
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
tpro
Salipiger profundus
Pathway
tpro00240
Pyrimidine metabolism
tpro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Ga0080559_TMP4208
Enzymes [BR:
tpro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
Ga0080559_TMP4208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
APX25004
UniProt:
A0A1U7DA14
LinkDB
All DBs
Position
3829297..3830214
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AA seq
305 aa
AA seq
DB search
MSLLKLSPAVAEALETGAPVVALESTIITHGMPWPQNLEMARKVEDTIRAEGAVPATIAV
IDGALCVGLEDAQLEALAQARGVAKLSRADLAVCMAQGGTGATTVAATMIGAARAGIATF
ATGGIGGVHRGAESSFDISADLQELAQTAVTVVCAGAKAILDLPKTLEVLETLGVPVIAY
GQDQLPAFWSREAGLRAPLRMDTPKAIAEAQAMRAALDLPGGQLVTNPIPEEAEIPRDEL
APIIARATKDAETHSIHGKHLTPYLLQRIFELTDGRSLESNIALVLNNARLGARIAKEIS
ALPAN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagccttctcaagctttcccccgccgtcgccgaagcgctcgagacgggtgctcccgtc
gttgcactcgagtcgacgatcatcacccacgggatgccgtggccgcagaacctcgagatg
gcgcgcaaggtcgaggacacgatccgcgccgagggggccgtgccggcgaccatcgcggtg
atcgacggcgcgctctgcgtgggtctcgaagatgcgcaactcgaagcgctggcgcaggcg
cgcggtgtcgccaagctcagccgcgccgaccttgccgtctgcatggcgcagggcggcacg
ggcgcgaccaccgtcgccgcgacgatgatcggtgccgcccgcgcgggcatcgcaaccttc
gcgaccggcggtatcggcggtgtgcaccgcggtgccgagagcagcttcgacatctcggca
gacctgcaagagctcgcacagaccgcggtcaccgtcgtctgcgccggcgcaaaggcgatc
ctcgacctgcccaagaccctcgaagtgctggagacgctcggcgtcccggtcatcgcctac
gggcaggaccagcttccggcgttctggtcgcgcgaggccgggctgcgtgcaccgctgcgc
atggacacgcccaaagccatcgccgaggcgcaggcgatgcgcgccgcgctcgacctgccg
ggtgggcagctcgtgaccaacccgatcccggaagaggccgagatcccgcgagacgagctc
gcaccgatcatcgcccgcgccaccaaggacgccgagacccacagcatccacggcaagcat
ctgacgccctaccttctgcagcgcatcttcgagctcaccgacggtcggtcgctcgagtcc
aacatcgcgctcgtgctgaacaacgcacggctcggcgcacgcatcgccaaggaaatcagc
gccctgcccgcgaattga
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