Thalassiosira pseudonana: THAPSDRAFT_11182
Help
Entry
THAPSDRAFT_11182 CDS
T01078
Name
(RefSeq) 3-hyroxyacyl CoA dehydrogenase
KO
K00022
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00062
Fatty acid elongation
tps00071
Fatty acid degradation
tps00280
Valine, leucine and isoleucine degradation
tps00310
Lysine degradation
tps00380
Tryptophan metabolism
tps00650
Butanoate metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01212
Fatty acid metabolism
Module
tps_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
THAPSDRAFT_11182
09103 Lipid metabolism
00062 Fatty acid elongation
THAPSDRAFT_11182
00071 Fatty acid degradation
THAPSDRAFT_11182
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
THAPSDRAFT_11182
00310 Lysine degradation
THAPSDRAFT_11182
00380 Tryptophan metabolism
THAPSDRAFT_11182
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
THAPSDRAFT_11182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
NAD_binding_2
F420_oxidored
YusW
Motif
Other DBs
NCBI-GeneID:
7449925
NCBI-ProteinID:
XP_002297045
JGI:
11182
UniProt:
B8LDA6
LinkDB
All DBs
Position
19
Genome browser
AA seq
350 aa
AA seq
DB search
MISSITFSRSIITFKTISKAITTNNTSSLRSISSTPITHFDKIGCIGLGLMGHGIAQTAA
AAAAKHNLHSSIVAYESDQSFLDKGRDRIQSSVDKLVKKEKMSGEEAQALMDKITFTTDR
DALNDTDFIVEAIIENMDLKKQLYAELGQTCKPSTIFASNTSSLSITEMAMASQRPQNFV
GVHFFNPVQIMKLVEVIRTDHTDEAVFDKTLEWVKAIGKVPVKCRDTPGFIVNRLLVPNL
MQAIILLERGDANTHDIDVSMQLGAGHPMGPLHLADYVGLDTCLFIMEGWVKDFPGEGAF
VVPATLREKVERGELGRKSGKGFYFWDGEKRGDPVGLNELFNKGGELDME
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatctcatcaatcaccttctcacgatccatcatcaccttcaaaacaatctccaaagcc
atcaccaccaacaacacctcctctctccgatccatctcctccacacccattacccacttc
gacaaaattggctgcatcggcctcggcctcatgggccacggcattgcccaaactgccgca
gccgcagcagccaaacataacctccactcctccattgtcgcttacgaatccgaccaatcc
tttctagacaagggacgggataggattcaatccagtgtggataaattggttaagaaggag
aagatgagtggagaagaggctcaggctttgatggacaagattacgtttactacggatcgc
gatgcattgaatgatacggacttcatcgtagaagccattatagagaatatggatttgaag
aaacagctgtatgcggagctaggacagacttgcaagccatccacgatatttgcatccaat
acgtcatcacttagtatcactgaaatggcaatggcatcacagcgtcctcagaactttgtc
ggagtacacttcttcaaccctgtccaaatcatgaaactcgtagaagtaattcgaacagat
cacacggatgaagcagtgtttgacaagacattggaatgggtcaaggccattggaaaagtt
ccagtaaagtgcagggacactcctggcttcatcgtgaacagattgctcgttccgaatcta
atgcaggccatcatactcttggagaggggagatgccaacacacacgatattgacgtcagt
atgcaactcggagcgggacatccaatgggaccactccatcttgcagattatgttgggttg
gacacgtgtctctttattatggaagggtgggtgaaggactttccgggagaaggagcgttt
gtagttcctgctactttgagagagaaggtggagaggggtgagttgggtaggaagagtgga
aaggggttttacttctgggatggcgagaagagaggggatccagttggattgaatgagttg
tttaataagggtggtgagcttgacatggagtag
DBGET
integrated database retrieval system