Thalassiosira pseudonana: THAPSDRAFT_13021
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Entry
THAPSDRAFT_13021 CDS
T01078
Name
(RefSeq) probable amp deaminase
KO
K01490
AMP deaminase [EC:
3.5.4.6
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00230
Purine metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01232
Nucleotide metabolism
tps04820
Cytoskeleton in muscle cells
Module
tps_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
THAPSDRAFT_13021
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
THAPSDRAFT_13021
Enzymes [BR:
tps01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.6 AMP deaminase
THAPSDRAFT_13021
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GFIT
Motif
Pfam:
AMP_deaminase
A_deaminase
Motif
Other DBs
NCBI-GeneID:
7447947
NCBI-ProteinID:
XP_002289781
JGI:
13021
UniProt:
B8BZA9
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Position
4:complement(1048037..1049852)
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AA seq
530 aa
AA seq
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NGVVEIYEASDFRRTNNLVTVPSLESFVTDYQRLVEIASSGAMRSFAFQRLQMLTAAFKM
HITINGSAEDEAQSGLLGTDFYRTMKVDNHIHLAAAASAKQFVNFVRDKLENEGDTVVME
DGQTLKEVFEKAGLDSNHLTIDAFNVLADYSVYQRFDNFNNKYSPFRMAQMRKIFLKTDN
HIDGRYFAELTKIVLARHEQRKGHTSAAEMRLSIYGMERNEWLQLAKWVLRDWKGGDFSG
NMISTHNRWLVQVPRLWRVYCKKGKGTNSFQQMLENLFIPLFEATLYPEEHPEVAELLNH
IVGFDSVDDEGSLEAPLSCCKPATWKQEDNPAYCWQLYYLWANIEILNRVRASKGLNQLA
FRPHAGETGDSMHLAATYMLCRSINHGINLDKQVSLQYLYYLDQVGMSISPLSNNFLFRK
IAQSPFPKMFKRGLNVTLSTDDPLLFHMSDDALLEEYSVARASFDLSMTDISEIARNSVL
QSGFEASLKEEWLGKNFRKGVTHCDENKTHVPLIRAKFRAEHLALEHLMV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
aacggcgttgttgaaatctacgaagccagtgactttcgtcgtacaaacaacctagtcacc
gttccttctcttgaatccttcgttactgactaccaacgtctcgtcgagattgcatcctcc
ggtgccatgagaagttttgcattccaacgtcttcaaatgctaactgctgcgttcaaaatg
cacattacaatcaatggatcggcagaggatgaagctcagagtgggttgttgggaactgat
ttctatcggacaatgaaggtcgacaatcatatacatctggcagctgctgcttctgccaaa
cagttcgtcaactttgtgagagacaagcttgagaatgagggagataccgtggtgatggaa
gatgggcagacgttgaaggaagtgtttgaaaaggctgggttggatagtaaccacttgaca
atcgatgcatttaatgtgcttgcggattactctgtctatcaacggttcgacaacttcaac
aacaaatactctccatttagaatggctcagatgagaaagattttcttgaagaccgacaat
cacattgatggaagatactttgctgagttgacaaagattgtattggctcgccacgaacag
cgtaaaggtcatacttcggctgcagaaatgaggctctccatctacggaatggaacgtaat
gagtggcttcaacttgcgaaatgggtgctccgtgattggaaaggtggggatttctctggc
aacatgatttcaactcacaatcgctggttggtgcaagttcctaggttgtggcgtgtgtat
tgtaagaagggaaagggaacgaactcgtttcaacaaatgttggagaatctattcattcca
ttgtttgaggcgacattgtacccagaggaacaccccgaagtcgccgagctactcaatcat
atcgttgggttcgactccgttgacgatgaaggatcattggaggcaccactctcgtgctgc
aaaccggccacgtggaagcaggaggataatcctgcctattgctggcagctttattatctc
tgggcaaacattgagattctaaaccgagttcgagcatccaaggggctcaatcaacttgct
ttcaggcctcatgctggagaaactggagattcaatgcatttggctgcaacatacatgtta
tgtcggtcgatcaaccacggaatcaatctggacaagcaggtgtcgcttcagtacctttac
tatcttgatcaggttggcatgtcaattagtccactctcaaataactttctattcaggaag
attgcgcagagtccgttcccaaagatgttcaaacgtggattgaatgttacactttcgact
gatgatcctcttctatttcacatgagtgacgatgcgttgttagaagaatactctgttgct
cgagcatcctttgatctatccatgacggatatctctgagattgctcgtaactcagtgttg
cagtctggatttgaagcttctctaaaagaggaatggctgggtaaaaactttaggaaagga
gttactcattgcgacgagaacaaaacacatgttcctctcatacgagcaaagtttcgggct
gagcatcttgcgttagaacatctgatggtg
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