Thalassiosira pseudonana: THAPSDRAFT_13806
Help
Entry
THAPSDRAFT_13806 CDS
T01078
Name
(RefSeq) predicted protein
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00970
Aminoacyl-tRNA biosynthesis
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
THAPSDRAFT_13806
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tps01007
]
THAPSDRAFT_13806
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_13806
Enzymes [BR:
tps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
THAPSDRAFT_13806
Amino acid related enzymes [BR:
tps01007
]
Aminoacyl-tRNA synthetase
Class I (A)
THAPSDRAFT_13806
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
THAPSDRAFT_13806
Prokaryotic type
Other AARSs
THAPSDRAFT_13806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-GeneID:
7453292
NCBI-ProteinID:
XP_002291547
JGI:
13806
UniProt:
B8C444
LinkDB
All DBs
Position
6:complement(1407354..1409024)
Genome browser
AA seq
538 aa
AA seq
DB search
IRTRFPPEPNGYLHIGHAKSMNMNFNLAFEKLGVPMENRRTIFRYDDTNPDAESPEYIDS
LRRDLEWLGWQPERTTYSSDNFQTLYELAVKLIENGLAYVCDMTKAEMEAQQAPIPSEDV
LPGRNRNTSVERNLKLFEEMKLGLHDEGAMTLRLKMDFESANPNMYDLVAYRIRYTPHPH
AGKGWCIYPNYDFTHGICDSLERIDYSICTLEFETRREPYYWILWALDMYRPKVYEMSRL
NLEYTVLSKRRLLKLVNANWVRGWDDPLMPTISGLRRRGYTKEIINSFCNDVGATRAMNV
VEMVKLFQVARLKLAESTRRAMAVLEPIKIVITNFGEESAKAGEGGLTYEVQNSPTDPSY
GSHSVTLTETIYIDSEDFRLEDDPSYFRLSPNQPVGLKYHGGNLVCDDIVRDGGNVKVLK
CHLDTTEGRPKPKSHISWVPCDGIPCEVRVYNHLFTVAEPSDRWEEELNSEREIVYANAI
IDPSVLELVDKKDVDKWKSNQALQFERLGYFVVDTDTTFDSSTKSGKLVFNRTVSLKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atacgcacgcgtttcccacccgagcccaatggctaccttcacattggacatgccaagagt
atgaacatgaattttaacctggcgtttgagaagttgggtgtgccaatggagaataggagg
actatctttcgatatgatgatacgaatcctgatgcggaaagtccggagtacattgattcg
ctgaggagggatttggagtggttggggtggcagcctgaacgcactacctattcttcggat
aactttcaaaccttgtatgagctggcggtcaagttgattgagaacggattggcctacgtg
tgtgatatgaccaaggcagagatggaggctcaacaggctcccattcctagcgaggacgtg
ttgccgggaagaaatcgcaacacttctgtagagaggaacttgaagctatttgaagagatg
aagttgggattgcatgatgagggagccatgacgttgcgtctgaagatggactttgagtcg
gccaatcccaacatgtacgatttggtagcgtaccgaatccgctacactcctcatcctcat
gcaggcaagggatggtgcatctatcccaactacgatttcactcacggtatctgtgactcg
ttggaacgtatcgactattccatttgcacgttggagtttgagacgaggagggagccttac
tattggattctgtgggcgttggacatgtatcgtcctaaggtgtatgaaatgtctcgtctc
aatttggagtacacggtgttgagtaagcgacgattgctgaagcttgtcaacgccaattgg
gtccgaggttgggacgatccattgatgcccacaatcagtggtcttcgtcgaaggggatac
accaaggaaatcatcaactccttttgcaatgacgtcggtgctactcgtgctatgaacgta
gtggaaatggtcaagttgttccaagtggcacgtttgaagttggcagagagtactcgtcgt
gccatggctgtgttggaacctatcaagattgtcattactaactttggtgaagagtctgcc
aaggctggggagggaggtttgacgtatgaggtgcaaaactcgcccactgatccatcttat
ggatcgcacagtgtgactttaactgagacaatttacattgattcggaagactttcggttg
gaggacgatccgtcgtatttccgtctttcgccaaatcaacctgtcggcttgaagtatcat
ggtgggaatcttgtctgtgatgacattgttagagatggaggcaatgtgaaggttctgaaa
tgtcacttggatactaccgagggacgccccaagcccaaatcacatatcagttgggttcca
tgcgacggtattccttgcgaggttcgcgtttacaaccatttgtttacagtggcggagcca
tctgataggtgggaagaggagttgaactcagagcgcgagattgtctacgccaatgccatt
attgatcccagtgtgctggagctcgtcgacaagaaggatgttgacaagtggaagtcaaac
caggcacttcagtttgaacgtcttggatactttgttgtggacaccgatacaacctttgac
tcttccaccaaaagtggaaagcttgtcttcaatcgcactgtcagcttgaaggag
DBGET
integrated database retrieval system