Thalassiosira pseudonana: THAPSDRAFT_22768
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Entry
THAPSDRAFT_22768 CDS
T01078
Name
(RefSeq) predicted protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tps01006
]
THAPSDRAFT_22768
Enzymes [BR:
tps01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
THAPSDRAFT_22768
Prenyltransferases [BR:
tps01006
]
Terpene biosynthesis
Squalene/phytoene synthase
THAPSDRAFT_22768
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF6576
SYF2
Motif
Other DBs
NCBI-GeneID:
7453193
NCBI-ProteinID:
XP_002290727
JGI:
22768
UniProt:
B8C314
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Position
5:complement(1330264..1332074)
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AA seq
543 aa
AA seq
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MRISSIVAATLITCDVASAWSSSAFTSPLSIKTQHRSQASTKRRDGSILMSAVSQKESSS
SSSSGQGRTTKEISNELALGVTLDGGPVIDFASVKDTTSRAEIALADSRKKYEASGATIS
PNPGGRLMGINDEVVAEVGYEIGEFAEEYLDKESGETVDELVQKVARYLRSKSNTDTFPE
MEEEEAPFTNQEKIRFNRLLSRAYEESGIVTSAFAKTFYLGTQVLPEPSMKAIWAIYVWC
RRTDEIVDAPRPAAHDPNAEMLTDLSEWEIRLERLFDRGEVVDVLDLPLLDCKVKYPTLP
ITPFSDMIRGMLMDIPGLGQERYDTWDELHLYCYRVAGTVGLMSMPVFGCAEGYTDEVAK
EPALSLGVAFQITNILRDVGEDAEKRERVYLPQRDMERFGVTERQIFDKVVDENYINLMK
FEIARARMYYARALRGVPMLRPESRLPVQLSLDAYGKILDKIEENGYDSLTKRAYVGKWE
KLAGIPASWYRTLDIAKAMPLPGDWERPSLEEYEKSLEQMLENKWVEQRGSSATSDYLQS
LNK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaggatatcatccattgtagcagccaccctgatcacgtgcgatgttgcttcagcatgg
tcatcgtctgcattcacatcaccgttatctatcaagacacagcatcggtctcaggcatca
accaaaagaagagacggatcaatcttgatgtctgctgtgtcacaaaaagaaagtagtagt
agtagcagcagcggccaaggacgcaccacaaaagagatttcaaacgaattagcattaggt
gttactctcgatggaggtccggtgattgattttgcctccgtcaaagataccacatctcgt
gcagaaatagcacttgccgactcacgaaagaagtacgaagccagtggtgctacaattagc
cctaatccgggaggaagattaatgggtatcaacgatgaggttgtggcagaggttggctat
gagattggggagtttgccgaagaatatttggacaaggagtctggagagactgtagatgaa
ttggtgcaaaaggttgctcgataccttcgttcaaagtcaaatacggatacgttccctgaa
atggaagaggaggaagcaccgtttactaatcaggagaagattaggttcaatcgtctctta
tcccgagcctacgaagaatcagggattgtcacatcagcatttgccaaaaccttttacctc
ggtacacaagttcttccggaaccatccatgaaggccatttgggcaatttacgtttggtgc
cgtagaacagatgaaatcgtcgatgcccctcgtcctgcggctcacgatcctaatgcagaa
atgttgacagatttgtcggagtgggagattcgtctcgagagactgtttgatcgaggggag
gttgtggatgtgctggacttgccactgttggactgtaaggtcaagtatcctacgttgccc
attacaccattttcagatatgatacgtggtatgttgatggacatccctgggctgggacaa
gagagatacgatacttgggatgagttgcacctatattgttatcgcgtggccgggactgtg
gggttgatgtccatgccagtgtttggatgtgcggaaggttacaccgatgaagttgcaaag
gagcctgctctttcgcttggtgttgcattccaaattaccaatattctccgtgatgtagga
gaggatgctgagaaacgcgaacgtgtataccttccccaacgagacatggagaggtttgga
gttactgaacgacaaatttttgacaaagtagtggatgagaactacattaatctcatgaag
tttgagattgctcgtgcccgaatgtactacgctcgtgctctgagaggtgtgcccatgctt
cgcccagagtcacgtctgccagtgcaactctcgttggatgcctacgggaagatattggac
aaaattgaggagaatggatatgattcgctgacaaaacgagcatatgttggtaagtgggag
aagttggcaggaatcccagcgtcttggtaccgtactcttgatattgcaaaggcaatgcca
ctccctggggattgggagcgtccgtcgttagaagaatatgaaaaaagtttggaacaaatg
ttggagaataaatgggtagaacaaagggggagctcagcgacaagtgattatttgcaaagc
ctcaacaaataa
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