KEGG   Thalassiosira pseudonana: THAPSDRAFT_262598
Entry
THAPSDRAFT_262598 CDS       T01078                                 
Name
(RefSeq) dna-directed RNA polymerase i
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tps  Thalassiosira pseudonana
Pathway
tps03020  RNA polymerase
tps03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THAPSDRAFT_262598
  09124 Replication and repair
   03420 Nucleotide excision repair
    THAPSDRAFT_262598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tps03021]
    THAPSDRAFT_262598
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_262598
Transcription machinery [BR:tps03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     THAPSDRAFT_262598
  RNA polymerase III system
   RNA polymerase III
     THAPSDRAFT_262598
  RNA polymerase I system
   RNA polymerase I
     THAPSDRAFT_262598
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      THAPSDRAFT_262598
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 7448182
NCBI-ProteinID: XP_002290360
JGI: 262598
UniProt: B8C3F5
LinkDB
Position
5:1665157..1665387
AA seq 76 aa
RITTRYLTKYERARVLGTRALQISMNAPVMVDLEGETDPLKIAQKELRERKIPIVIRRYL
PDGSHEDWGIDELIVD
NT seq 231 nt   +upstreamnt  +downstreamnt
agaatcacgacgcgatatttgaccaagtatgaacgagcgagagtgctgggaacacgtgct
ttgcagattagtatgaatgcaccggtgatggtggatttggagggggagacggatccactc
aagattgctcagaaggagttaagggagaggaagattccaattgtgatcaggcgatattta
cctgatggaagtcacgaggattgggggattgatgagttgattgtggattag

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