Thalassiosira pseudonana: THAPSDRAFT_269908
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Entry
THAPSDRAFT_269908 CDS
T01078
Name
(RefSeq) pyruvate carboxylase-like protein
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00020
Citrate cycle (TCA cycle)
tps00620
Pyruvate metabolism
tps01100
Metabolic pathways
tps01200
Carbon metabolism
tps01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
THAPSDRAFT_269908
00620 Pyruvate metabolism
THAPSDRAFT_269908
Enzymes [BR:
tps01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
THAPSDRAFT_269908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
HlyD_D23
ATPgrasp_ST
PTE
DUF2118
GARS_A
GCV_H
Motif
Other DBs
NCBI-GeneID:
7444206
NCBI-ProteinID:
XP_002294371
JGI:
269908
UniProt:
B8CE42
LinkDB
All DBs
Position
17:298077..301932
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AA seq
1155 aa
AA seq
DB search
MAANRAEISVRIQRAVTELNMGSVAIYVDEDRYGQHRWGADESYLLNKAEGATPISAYLD
IDQIIKIAKDSGVDAIHPGYGFLSESPQFAQACADAGITFVGPTVENLNTFSDKTSARNA
AIAAGVPVVPGSDALKTNDEVNAFVDEVGLPVIIKAAMGGGGKGMRVVRNREDLIPFFES
ASSEALASFGDGSVFVERFVYRPRHIEIQIIGDGEGNVIHLWERDCSIQRRHQKVIEMAP
AWSLPDSLRKELHDYAVNLTSQAKYKNAGTVEFLVDQELRPYFIEVNPRIQVEHTVTEEV
TGIDVVQTQIRIAGGATFEEIGLRQEDIKPRGVAIQCRVTTENPERDFAPDTGTISLYRH
SAGAGIRMDGVGYSGLAITPYFDSMIVKYTARGSSFAETVARMKRVLIECRIRGVKTNIP
FLLNVLTHPEFETGIVTTAFIDENPQLKKVSDDQRKVGAKERLIRYLANLAVNGHPPELG
ADPTKITKSHDKDTTKILLPPSAAGASKGGVTTSSGGMRKILLEHGPEGYAKAVREHKGL
LLMDTTWRDAHQSLLATRMRTKELERCAEYTNTALANAFSLEMWGGATFDVAMRFLHECP
WERLESLREKVPDIPFQMLLRGANAVGYTNYPDNVVYKFCKQAHDSGIDIFRVFDSLNYL
DNLKLGVDAAGAAGGFVEGAMSYTGNVADSSKGKYNLEYYVKLADELVGMGVHSLAIKDM
AGLLTPAATKMLVGALREQHPNTPIHVHTHDTPGVGVASMLAAAEAGADVVDVAIDAMSG
LTSQPSMGALVSMFAGTEADTGVDKNLIGPLNTYWENVRSLYIPFESGQLSGASDVYEHE
IPGGQYTNLLYQSRQLGLTDKWPQIKQKYAEANIVLGDIPKVTPSSKVVGDLAQFMVSQN
LDPQQVLEQAEKLAFPESVVQYLRGEIGIPPGGFPEPLRTKVLSSRNLEGIDGRPGSSLP
DYNFEEATKLLKEKFGSKYIDDKDVLSYALYPSVFTEWKEYESVFGEVSILPTDLFLNPM
KENDEVEFDINPGKKMIIKLVSISPAREDGQRTVTFEINGERWFMPVTDQNVVKDADIRR
KASGPNEVGSPMPGVIVGLKVKEGDVIEEGDPLATLSAMKMETVIPATVSGVVKHIAVTV
GDKVEGDDLLVEIES
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaccgtgctgaaatttccgtccgtattcaacgtgccgtcaccgaactcaac
atgggatcagtcgccatttacgtcgatgaagatcgatacggtcagcatcgttggggtgcc
gatgagagttatttgttgaacaaagcggaaggtgccacgcccatctcagcctacctcgac
attgatcaaatcatcaagattgccaaagatagtggtgtggatgccatccaccccggctat
ggtttcttgagtgaaagccctcagttcgctcaggcgtgtgctgatgctggtatcaccttc
gtcggacctacagtggagaacctaaacacatttagtgacaagacgtccgctcgcaacgct
gccattgctgccggtgtacctgtcgtgcctggaagtgatgccctcaaaactaacgatgaa
gttaatgcctttgtcgatgaggttggtctccccgtcattatcaaagctgctatgggaggt
ggaggaaagggaatgcgtgtcgttcgtaaccgtgaggacctcatccccttctttgaatcg
gcatcgtccgaggcacttgccagttttggggatggaagtgtcttcgttgaacgtttcgtc
tatcgacctcgtcacattgaaatccaaatcattggagacggcgaaggaaacgttatccat
ctatgggagcgagactgttctatccaacgtaggcaccagaaggtgattgaaatggcaccc
gcttggagtttgcctgatagtttgaggaaggagttgcatgactatgctgtcaatttgacg
agccaggccaagtataagaatgcagggactgtggagtttttggtggatcaagagcttagg
ccatactttattgaggtcaatcctaggattcaggtggaacacactgtcactgaggaagta
actggcattgacgtcgttcaaactcaaatccgcatcgccggcggagctacctttgaagag
attggcctccgtcaagaagacatcaaaccacgtggcgttgccatccaatgtcgtgttact
accgagaaccctgaacgtgactttgcccccgatactggtaccatctctctttacaggcat
tcggctggtgctggtattcgcatggatggtgtgggatactctggattggccattactccc
tactttgactccatgattgtcaagtacacggcccgtggatccagttttgccgagactgtg
gcaaggatgaagcgtgtgttaatcgaatgtcgtattcgtggagtcaagacgaacattcca
ttcttgctcaacgtgttgactcaccctgagtttgagacgggtattgttaccactgctttt
attgatgaaaatccccagctgaagaaggtttctgatgatcagcgtaaggttggagctaaa
gaacgcttgattcgttatttggccaacttggctgtcaatggacatcctccggagttggga
gctgatcctacaaagattaccaagagccacgataaggatacaaccaagattttgttgcct
cccagtgctgcgggtgcttcaaaaggtggtgtcaccacatcctctggtggtatgaggaag
attctcttggaacacggacctgaaggctatgccaaagccgtgcgtgaacataagggcctt
cttctcatggatactacctggcgtgatgctcaccagtctctccttgccacccgtatgcgt
acgaaagagttggaacgatgtgctgaatacacaaacactgctttggccaatgcgttctct
ctggagatgtggggtggagctacttttgacgttgccatgaggtttttgcacgagtgtccc
tgggagcgattggaaagtttgagggagaaggtgcctgatattccattccagatgttactt
cgtggagccaacgctgtgggatataccaactaccctgacaatgtggtttacaagttctgt
aagcaagcacacgacagtggaattgatatcttccgcgtatttgactcgttgaactacttg
gacaacctcaagttgggtgtcgatgccgccggtgctgctggaggatttgtagagggagcc
atgtcttacactggaaatgtggctgactcttccaaggggaaatacaaccttgagtactac
gtgaaactagcagacgaactcgttggtatgggagtgcactcgttggcaatcaaggatatg
gcgggtcttcttactcctgcagcaacaaagatgttggtaggcgcccttcgtgagcagcac
cctaatactcctatccacgttcacactcacgatactcctggagtaggagttgcttccatg
ctcgcagccgcggaggctggggccgatgtcgtggatgttgcgattgatgccatgtctggg
ttgacctctcaaccttctatgggagcattggtcagcatgtttgcaggaacagaagctgat
actggagttgacaaaaatcttattggacctctcaacacgtactgggaaaacgtccgttcc
ctctacattccatttgaatctggccagctttcgggagcatcggatgtgtatgagcatgaa
attcctggaggacagtacaccaatcttttgtatcaatctcgtcaactcggactcactgac
aagtggcctcagatcaagcagaagtacgcagaagcaaacatcgttttgggtgacattcca
aaggtcactccatccagtaaggttgttggagatcttgcacaattcatggtatctcagaat
ctcgatcctcagcaagttcttgaacaagctgaaaaactcgccttccctgaatccgttgtg
caatacttgagaggagagattggtattcctcccggtggtttccctgaacctcttcgtacc
aaggttctttcttcgcgtaatcttgagggcattgacggacgtcctggatcatcccttccc
gattacaactttgaggaggctacgaagctcttgaaggaaaagtttggctcaaagtatatt
gacgacaaggatgtcttgtcttatgctctctaccccagcgtatttacggagtggaaagag
tacgagtcggtatttggagaggtgtcgattcttcctacggatcttttcctcaatcctatg
aaggagaatgacgaagtggagtttgatatcaaccccggcaagaaaatgatcatcaagctt
gtttccatttctcctgcgagggaggatggccagcgtactgtaacttttgagattaatgga
gagaggtggttcatgccagttactgatcaaaatgttgtgaaggacgctgatattcgacga
aaggcttcgggacctaacgaggtaggatctcctatgcctggtgtcattgttggattgaag
gtgaaggaaggagatgttattgaggagggtgatccgttggctactctttcggcaatgaag
atggagactgtcattccagccactgtctctggagttgtcaagcacattgctgtaactgtc
ggagacaaggttgagggtgatgatttgcttgttgagattgaatcgtaa
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