Thalassiosira pseudonana: THAPSDRAFT_38576
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Entry
THAPSDRAFT_38576 CDS
T01078
Name
(RefSeq) predicted protein
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00600
Sphingolipid metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
THAPSDRAFT_38576
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tps01007
]
THAPSDRAFT_38576
Enzymes [BR:
tps01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
THAPSDRAFT_38576
Amino acid related enzymes [BR:
tps01007
]
Aminotransferase (transaminase)
Class II
THAPSDRAFT_38576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
7449468
NCBI-ProteinID:
XP_002294799
JGI:
38576
UniProt:
B8CF76
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All DBs
Position
22:45523..46791
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AA seq
401 aa
AA seq
DB search
LNFATHDYLSTSSSPTLRQTALSSLSHYGCGSCGPRGFYGTIDAHLELEQCMSEFLQTES
AILYSDGASATTSTVAAFAKRGDLLIVDEGVNEALLVGVSLSRANVRYFRHNDMKDLRRI
LEKVRAQDVALKRKPTDQRRFLVVEGLYKNWGTLAPLKEIVALKEEFHYRLIVDDSHGIG
TLGKSGRGSLEHAGLKPMVHAEIVTFSIENAFGSVGGMTVGSEEVVDHQRLSGAGYCFSA
SAPPFLSKVDATNTAGELAGEQLLNRLGQSIANLYSTLTNSSHPYALKLRNRLVITSNPI
SPILYLRLSDQEATRRTRSEQTLILDQIAHHSLVEGKVAVVSTGGHVKKFLQLVPEPCLR
VVANASQSREDVEELVKALGEAVEAVLCKNVFGLAIIDENK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ctcaactttgcaacacacgactacctctccacatcttcctctcccactcttcgtcaaact
gccctctcatccctctcccactacggatgtggctcttgtggtccacgtggcttttacgga
acaattgatgctcacttggagttggaacagtgcatgtcggagtttttacaaaccgagagt
gccattttgtattcggatggtgctagtgcaactacctcgaccgtggctgcgtttgcgaaa
aggggggatctgttgattgtcgatgagggagtgaatgaggcgttgttggtgggtgtttca
ttgagtagggccaatgtgcgatacttccgtcacaatgatatgaaggacttgagacgtatt
ttggaaaaggttcgtgctcaggatgtggcattgaaacgaaagccgacagatcaaaggagg
ttcttggtggtggagggactgtataagaattgggggactttggctccattgaaggagatt
gtggcgttgaaagaagagtttcattatcggctgattgtggatgattctcacggtattggt
acgcttggaaagagtggacggggttcattagagcacgcgggacttaagcccatggttcat
gcggagattgtcacgtttagtattgagaatgcatttggaagtgtaggtggaatgacggta
gggagtgaagaggtggtggatcatcagaggctgagtggagctggatattgctttagtgcg
agtgctcctccgtttttgagtaaggttgatgcaacaaacactgctggtgaattggctgga
gagcagctattgaatcgtctcggtcaaagcattgccaacctctactccacgctcaccaac
tcatcacacccgtacgcactcaagctacgcaatcggctagtcatcacttccaaccccatc
tctccaatcttgtacctccgactctccgatcaagaagcaacgagacgaactcgatccgaa
caaacattgatcctagaccaaattgcacaccatagcttagtggaagggaaggtggcggtg
gtatcaacaggaggtcatgtcaagaagttcttacagttggtgccggagccttgtttgaga
gttgtggcgaatgctagtcagagtagagaggatgtagaagagttggtcaaggctttgggc
gaggctgtggaggctgtattatgtaagaatgtgtttggattggcgatcattgatgagaac
aaatag
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