KEGG   Thalassiosira pseudonana: THAPSDRAFT_38815
Entry
THAPSDRAFT_38815  CDS       T01078                                 
Symbol
Rpb8
Name
(RefSeq) RNA polymerase
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
tps  Thalassiosira pseudonana
Pathway
tps03020  RNA polymerase
tps03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THAPSDRAFT_38815 (Rpb8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    THAPSDRAFT_38815 (Rpb8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tps03021]
    THAPSDRAFT_38815 (Rpb8)
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_38815 (Rpb8)
Transcription machinery [BR:tps03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     THAPSDRAFT_38815 (Rpb8)
  RNA polymerase III system
   RNA polymerase III
     THAPSDRAFT_38815 (Rpb8)
  RNA polymerase I system
   RNA polymerase I
     THAPSDRAFT_38815 (Rpb8)
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      THAPSDRAFT_38815 (Rpb8)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 7448892
NCBI-ProteinID: XP_002295166
JGI: 38815
UniProt: B8CGC8
LinkDB
Position
23:284217..284678
AA seq 153 aa
MATATSARVTLFEDIFEITHLNPEGKKFDLVNRLSATGTTFECDLLLDYNCQIYSLLEGE
KMTLVLASTLNLDGTPDDHTSYNPATSHNNELTLADNYEYVMHGRVFDVSYKKDGVVVIA
ISFGGLLCRLTGDQRHLSSVLPDMRLYVLIKKD
NT seq 462 nt   +upstreamnt  +downstreamnt
atggccaccgcaacctccgcccgcgtaaccctcttcgaagacatcttcgaaatcacccac
ctcaaccccgaaggcaaaaaattcgacctcgtcaaccgcctctccgccacgggaaccacc
ttcgaatgcgacctcctcctcgactacaactgtcaaatctactcattactggagggtgaa
aagatgactttggtcctagcgtccactcttaatttagatggaactcccgatgatcatacc
agttacaatccggcgacgtctcataataacgagttgacactggcggataattatgagtat
gttatgcatgggagggtgtttgatgttagttataagaaggatggggttgtggttattgct
atttcgtttggggggttgttgtgtaggttgacgggggatcagaggcatttgagcagtgtt
ttgccagatatgaggttgtatgttttgattaagaaggattag

DBGET integrated database retrieval system