Thalassiosira pseudonana: THAPSDRAFT_411
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Entry
THAPSDRAFT_411 CDS
T01078
Symbol
SCS2
Name
(RefSeq) precursor of synthetase
KO
K01899
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00020
Citrate cycle (TCA cycle)
tps00640
Propanoate metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
THAPSDRAFT_411 (SCS2)
00640 Propanoate metabolism
THAPSDRAFT_411 (SCS2)
Enzymes [BR:
tps01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
THAPSDRAFT_411 (SCS2)
6.2.1.5 succinate---CoA ligase (ADP-forming)
THAPSDRAFT_411 (SCS2)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-GeneID:
7443730
NCBI-ProteinID:
XP_002289446
JGI:
411
UniProt:
B8C013
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Position
4:1679905..1680910
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AA seq
299 aa
AA seq
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MSANAKVWIDKDTRVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQEHLGLPVFDS
VADAVLEVKPDASVIYVPPPYCAAAILDAIENEIPLVVAITEGVPQQDMVRVKKALLSQD
KTRLIGPNCPGIIKPGECKIGIMPGYIHKAGKIGVVSRSGTLTYEAVHQTTVTGLGQSTC
VGIGGDPFNGTNFIDCLERFRDDPQTEGIIMIGEIGGSAEEEAAEWWANNGDPNKPVVGF
IAGMTAPPGRRMGHAGAIVAGGKGGANEKFAALEAAGIHVTRSPAQLGTTMMRAMGLAE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaatgcgaaggtctggatcgacaaagatacgagagtgatctgtcaggggttt
accggcaagcagggtactttccatagcacccaagcaattgaatacggcaccaacatggtc
ggcggagtcacccccaaaaagggaggacaagaacaccttggcctacccgtctttgactca
gtcgccgatgcagtcttggaagtcaaacccgatgcctccgtcatctacgtccctcctcca
tactgtgctgctgccattcttgatgccattgagaatgagatcccattggttgttgcaatt
acggaaggagtacctcagcaggatatggtacgagtgaagaaggcactgctttctcaggat
aagactcgtctcattggccccaattgtcccggaattatcaaacctggtgaatgcaagatt
ggtattatgcctggatacattcacaaagctggtaagattggagttgtctctcgctctgga
acgttgacatacgaggcagtacatcagactacggttacggggctcggacaatccacttgt
gttggaattggaggggatcctttcaacggtaccaactttattgattgtttggagaggttt
agggatgatcctcagactgagggtatcatcatgatcggagagattggaggaagtgctgag
gaggaggctgcggaatggtgggctaacaatggggatcctaacaagccagttgtaggtttc
attgcgggtatgactgctcctccgggaagacgtatgggacatgctggggccatcgttgcg
gggggtaagggaggagccaatgagaagtttgcagcgttggaggcagctggaattcacgtg
acgcggtcccctgctcagttgggaactacaatgatgagggccatggggcttgccgagtag
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