KEGG   Thalassiosira pseudonana: THAPSDRAFT_411
Entry
THAPSDRAFT_411    CDS       T01078                                 
Symbol
SCS2
Name
(RefSeq) precursor of synthetase
  KO
K01899  succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00020  Citrate cycle (TCA cycle)
tps00640  Propanoate metabolism
tps01100  Metabolic pathways
tps01110  Biosynthesis of secondary metabolites
tps01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    THAPSDRAFT_411 (SCS2)
   00640 Propanoate metabolism
    THAPSDRAFT_411 (SCS2)
Enzymes [BR:tps01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.4  succinate---CoA ligase (GDP-forming)
     THAPSDRAFT_411 (SCS2)
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     THAPSDRAFT_411 (SCS2)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2
Other DBs
NCBI-GeneID: 7443730
NCBI-ProteinID: XP_002289446
JGI: 411
UniProt: B8C013
LinkDB
Position
4:1679905..1680910
AA seq 299 aa
MSANAKVWIDKDTRVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQEHLGLPVFDS
VADAVLEVKPDASVIYVPPPYCAAAILDAIENEIPLVVAITEGVPQQDMVRVKKALLSQD
KTRLIGPNCPGIIKPGECKIGIMPGYIHKAGKIGVVSRSGTLTYEAVHQTTVTGLGQSTC
VGIGGDPFNGTNFIDCLERFRDDPQTEGIIMIGEIGGSAEEEAAEWWANNGDPNKPVVGF
IAGMTAPPGRRMGHAGAIVAGGKGGANEKFAALEAAGIHVTRSPAQLGTTMMRAMGLAE
NT seq 900 nt   +upstreamnt  +downstreamnt
atgtctgcgaatgcgaaggtctggatcgacaaagatacgagagtgatctgtcaggggttt
accggcaagcagggtactttccatagcacccaagcaattgaatacggcaccaacatggtc
ggcggagtcacccccaaaaagggaggacaagaacaccttggcctacccgtctttgactca
gtcgccgatgcagtcttggaagtcaaacccgatgcctccgtcatctacgtccctcctcca
tactgtgctgctgccattcttgatgccattgagaatgagatcccattggttgttgcaatt
acggaaggagtacctcagcaggatatggtacgagtgaagaaggcactgctttctcaggat
aagactcgtctcattggccccaattgtcccggaattatcaaacctggtgaatgcaagatt
ggtattatgcctggatacattcacaaagctggtaagattggagttgtctctcgctctgga
acgttgacatacgaggcagtacatcagactacggttacggggctcggacaatccacttgt
gttggaattggaggggatcctttcaacggtaccaactttattgattgtttggagaggttt
agggatgatcctcagactgagggtatcatcatgatcggagagattggaggaagtgctgag
gaggaggctgcggaatggtgggctaacaatggggatcctaacaagccagttgtaggtttc
attgcgggtatgactgctcctccgggaagacgtatgggacatgctggggccatcgttgcg
gggggtaagggaggagccaatgagaagtttgcagcgttggaggcagctggaattcacgtg
acgcggtcccctgctcagttgggaactacaatgatgagggccatggggcttgccgagtag

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