Thalassiosira pseudonana: THAPSDRAFT_42704
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Entry
THAPSDRAFT_42704 CDS
T01078
Symbol
LEU2
Name
(RefSeq) 3-isopropylmalate dehydratase
KO
K01702
3-isopropylmalate dehydratase [EC:
4.2.1.33
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00290
Valine, leucine and isoleucine biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01210
2-Oxocarboxylic acid metabolism
tps01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
THAPSDRAFT_42704 (LEU2)
Enzymes [BR:
tps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
THAPSDRAFT_42704 (LEU2)
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GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Aconitase_2_N
Motif
Other DBs
NCBI-GeneID:
7442154
NCBI-ProteinID:
XP_002294422
JGI:
42704
UniProt:
B8CEE0
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Position
17:575148..578029
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AA seq
806 aa
AA seq
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MIFRFAAVAATLVLSRSVESFAPHKSFTRPIVSVGASTTSLSAASTLYDKIWSDHVVNDD
GLSSLLYIDRHLVHEVTSPQAFEGLRLANRSVRRPDCTLSTVDHNVPTTDRSALVDVASF
IEETASRTQVLQLQTNVADFDIPYFGMEDERQGIVHIIGPEQGFTLPGTTCVCGDSHTAT
HGAFGALAFGIGTSEVEHVLATQTLPQTKAKNMLIRIDGDLLPGVTSKDIILHICSVIGT
AGGTGATIEFAGKAIENLSMEARMSISNMAIEAGARAGIIAPDDVTFEYLKGRPMCPSGE
DWDRAVEYWRSLKTDEGAVFDKTVVIEAKDIAPTVTWGTSPQDAMPVDGIVPRIDEPGHD
EARQAAVKRSLEYIGLEGGEPIEGTPIGKVFIGSCTNGRIEDIREVAAIAIGRKVADGVH
AMVVPGSGLVKHQAEQEGLDKILTEAGFDWREPGCSMCLAMNPDKLKPQERCASTSNRNF
EGRQGNGGRTHLMSPAMAAAAAVSGGIADVRKFPYLGEESNDPRVANKDVRSNVFTTESF
VSPGAVISPPAPYQARQGESASTSGGAAGLPKFDVLKGVVAPLDIQNIDTDMIIPKEFLK
TIQRAGLGFAAFAELRYENPEEVATIGADVAKPRSDFVLNQPGYEKTSILIAGDNFGCGS
SREHAPWSINDMGIRCIISTSFADIFYNNCINNGMLPVTLDRASVEKLLEDAKVAGTEIT
VDLVNSKVIRPNGEEFPFEIDAFKKHCLLNGLDKIGLTLDKEEMIIAFEKERSEKYPWLD
GASMKVPQKIAMYPSAGIWSKVEASA
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcgcttcgctgctgtggcagccaccctcgttctctcccgaagcgtcgagtcc
ttcgccccgcataaatccttcacgcgtcccatcgtcagcgtcggtgcatccaccacctcc
ctctccgccgcatccaccctctacgacaaaatctggtccgaccacgtagtcaacgacgac
ggcctctcctccctcctctacatcgaccgccacctagtccacgaggtgacctccccccaa
gcattcgagggcctccgtctcgccaaccgctccgtccgtcgacccgactgcaccctgtcc
acggtcgatcacaacgttcccaccaccgaccgatcggccttggtggatgtggcgagtttc
atcgaggagacggcgagtcgtacgcaggtgttgcagttgcagacgaatgtggcggatttt
gatattccgtattttggaatggaggacgagaggcaggggattgtgcatatcattggaccg
gagcaggggtttacgttgccggggactacctgtgtttgtggggatagtcatacggcgact
catggggcgtttggggcgttggcgtttgggattgggacgagcgaggtggagcatgtgttg
gctactcagaccctcccccaaaccaaggccaaaaacatgctcatccgcatcgacggcgat
cttctccccggcgtcacctccaaagacattatcctccacatctgctccgtcatcggcacc
gccggtggaacgggtgccaccattgaattcgccggaaaggctattgagaacctatccatg
gaggctaggatgagtatctccaatatggccattgaggctggtgctcgtgctggaatcatt
gctccggatgatgttacttttgaataccttaaggggaggccaatgtgtccttcgggagaa
gattgggatagagccgtggagtattggagatcgttgaaaacggatgagggagctgtgttt
gataagactgtggtcattgaggcaaaggatattgcacctactgttacgtggggaacgtca
cctcaggatgccatgcccgtggatggtatcgttcctcgtattgacgaacctggacatgat
gaggctcgtcaggcggctgtcaagcgtagtttggagtacattggattggagggaggggaa
cccattgaaggaactcccattggaaaggtctttatcggaagttgcaccaatggacgtatc
gaggacattcgtgaggttgccgccattgcgattggacgcaaggttgccgatggagtgcat
gccatggttgttcctggatctggacttgtcaagcaccaagcagagcaggagggactcgac
aaaatcttgacagaggcggggtttgattggcgtgagcccgggtgttccatgtgccttgca
atgaaccctgataagttgaagccacaggaacgttgtgcttctacttccaaccgtaacttt
gagggaaggcaaggaaacggaggacgtacccatttgatgtctcctgccatggcggcggct
gctgcggtgagtggagggattgccgatgtgaggaagtttccatatttgggcgaagagagc
aatgatccacgtgtggctaacaaggatgtcaggagtaatgtgttcacgacggagtcgttt
gtgtcacctggagcagtcatttcaccaccagctccgtatcaggctaggcagggagagagt
gcttccacttccggtggagctgctgggcttcccaagtttgacgtgctcaagggagttgtc
gctcctctcgatattcaaaacattgataccgatatgatcatccccaaggaattcctcaag
actattcaacgtgctggattgggatttgctgcttttgctgaattgaggtatgaaaatcct
gaggaggttgccactattggagcggatgttgccaagcctcgttcggactttgtcttgaat
cagcctgggtatgaaaagacttccatccttattgcgggagataactttggatgtggaagt
agtagggagcatgctccttggtctatcaatgacatgggtattcggtgtatcatcagcacg
tcgtttgcggatatcttttacaacaactgcatcaacaatggaatgttgccggtcactttg
gatagggcgagtgtggagaagcttttggaggacgccaaggttgctggaacggagattacg
gtggatctcgtgaatagcaaggtcattcgtcccaacggagaggaattcccatttgaaatc
gatgctttcaagaagcactgtctcttgaacggtcttgataagattggactcacccttgat
aaggaggaaatgattattgcctttgagaaggaacgatctgagaaatatccttggttggac
ggtgcttcaatgaaagtccctcagaagattgccatgtatcctagtgctggaatttggagc
aaggtggaagcgtctgcttaa
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