Tsukamurella pulmonis: TPB0596_05920
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Entry
TPB0596_05920 CDS
T08311
Symbol
lysS_1
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TPB0596_05920 (lysS_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tpul01007
]
TPB0596_05920 (lysS_1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpul03016
]
TPB0596_05920 (lysS_1)
Enzymes [BR:
tpul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
TPB0596_05920 (lysS_1)
Amino acid related enzymes [BR:
tpul01007
]
Aminoacyl-tRNA synthetase
Class I (A)
TPB0596_05920 (lysS_1)
Transfer RNA biogenesis [BR:
tpul03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TPB0596_05920 (lysS_1)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
DUF6527
Motif
Other DBs
NCBI-ProteinID:
BDD80829
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All DBs
Position
619218..620993
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AA seq
591 aa
AA seq
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MTERNAPLDDWVSRLADEAVAFAERNETPVKVASGISPSGPIHLGNLREVMVPHLVADEL
RRRGLQVEHIISWDDFDRFRKVPNVPGVDDSWAEHIGKPLTRVPAPHGSDAENWAEHFRR
ELQGALEELGVEYRGISQTQMYTSGAYIDQVLHAMAQRGRIDSILERYRTLDRGDSTPVQ
ENAEEVDADAAEAASGAAQDADGSSDSGYYPYKPYCSACGTDFTTVTAYDDESTELTYTC
RCGHGETVLLREHTDGKLVWKVDWPMRWAFEKITFEPSGVDHQSPGSSFAVGKDVAPIFG
WKRPLGPMYAFVGIRGMAKMSSSKGGVPTAAIALRYLEPPLLRWLYGRKKPNQSFDVALD
GELPRTYDEWDALVRKTGGDKAQPGDIAAHARAASVLDTASGRVRELPLTPRPMPYKTLA
SVVDITTGDDEQTLRILAALEPDRPLTELEPLRPRLDRASAWVAEQMPADERTVVRAQPD
AELLASLTDEQREGLRLLLEGSGTPAPAGLGRLEDDWTLAGITHQVYGVAKVQRGLGADQ
IVKGDKELAAAQRAFFVLLYRLLVSSDTGPRLPTLLLAIGVDRVRSLLTPA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaacgcaacgctcccctggacgactgggtctcgcgactcgccgatgaggccgtg
gccttcgccgagcggaacgagacgccggtgaaggtggcgtcgggcatctccccgtcgggc
ccgatccacctcggcaatctgcgtgaggtgatggtgccgcacctcgtcgccgacgagctg
cgccgccgtggcctgcaggtcgagcacatcatctcctgggacgatttcgaccggttccgc
aaggtcccgaacgtgcccggcgtcgacgattcctgggccgagcacatcggcaagcccctc
acgcgcgtcccggccccgcacggttcggacgcggagaactgggccgagcatttccgccgc
gaattgcagggtgcgctcgaagaactcggtgtcgagtaccgcggaatcagccagacgcag
atgtacacctcgggtgcgtacatcgatcaggtgctgcacgcgatggcgcagcgggggcgc
attgattccatcctggagcgttatcggacgctcgatcgcggcgattcgacgcccgtgcag
gaaaatgcggaagaagtggacgcggacgccgccgaggcggcatcgggagcggcgcaggac
gccgacggctcgagcgattccggttactacccgtacaagccctactgctccgcgtgcgga
actgatttcaccaccgtgacggcgtacgacgacgagtcgaccgagctcacttatacgtgc
cggtgcggccatggggagaccgtgctcctgcgcgagcacaccgacgggaagttggtgtgg
aaggtcgattggccgatgcgctgggccttcgagaagatcactttcgagccgtccggcgtc
gatcaccaatcgcccggctcctcgttcgccgtgggcaaggacgtcgcgccgatcttcggg
tggaagcggccgctcggccccatgtacgccttcgtcggcatccggggcatggccaagatg
tcgtcgtcgaagggcggcgtcccgaccgccgcgatcgcgctgcgctacctcgagccgccg
ctgctgcgctggctctacggccgcaagaagccgaaccagtccttcgacgtggcgctcgac
ggcgaactgccccgcacctacgacgagtgggacgcgctggtgcgcaagacgggcggcgac
aaggcgcagcccggcgacatcgccgcgcacgcccgcgccgcatccgtgctggacacggcg
tcggggcgggtgcgggagctgccgctcacgccgcggcccatgccgtacaagacgctggcc
tccgtcgtcgacatcaccaccggcgacgacgagcagacgctgcgcatcctcgcggcgctc
gagcccgaccggccgctgacggaactggagccgctgcgcccccgcctcgaccgggccagc
gcctgggtcgccgagcagatgccggccgacgagcggaccgtggtgcgcgcccagccggac
gccgagctgctggcctcgctcaccgacgagcagcgcgagggcctgcggctgctgctcgag
ggctcgggtacgcccgcgcccgcgggcctcggccggctcgaggacgactggacgctggcg
ggcatcacccaccaggtgtacggcgtcgcgaaggtccagcgcggcctcggtgcggatcag
atcgtcaagggcgataaggaactggccgcggcgcaacgcgcattcttcgttctgctctac
cgcttgctggtgagcagcgataccggcccgcgcctgcccacgctgttgctcgccatcggc
gtcgatcgcgtgcgttccctgctcactccggcgtag
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