Tsukamurella pulmonis: TPB0596_24140
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Entry
TPB0596_24140 CDS
T08311
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
tpul
Tsukamurella pulmonis
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tpul03051
]
TPB0596_24140 (pafA)
Enzymes [BR:
tpul01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
TPB0596_24140 (pafA)
Proteasome [BR:
tpul03051
]
Prokaryotic proteasome
Bacterial regulatory particles
TPB0596_24140 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
BDD82651
LinkDB
All DBs
Position
complement(2383782..2385125)
Genome browser
AA seq
447 aa
AA seq
DB search
MGIETEFGVTCTFHGHRRLSPDEIARYLFRRVVSWGRSSNVFLQNGSRLYLDVGSHPEYA
TAECDSILQLVTHDKAGERVLEDLLLDAEQRLQDEGIGGDIYLFKNNTDSAGNSYGCHEN
YLVSRVGEFSRIADVLLPFLVTRQLICGAGKVLLTPKNATYCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTAHLVLEMIEAGVQFRDFSL
DNPIRAIREVSHDTTGRHEVRLAGGRQAGALDIQREYYTKAVDYLATREPDAQLAQVVDL
WGRTLDAVESQDFSGVDTEIDWVIKRKLFQRYLDKYSMDLADPKIAQLDLAYHDIKRGRG
VFDVLQRRGMAARVTTDEAIDEAVKTPPQTTRAKLRGDFITAAQAAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRNVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcgagaccgagttcggtgtcacgtgtaccttccacgggcaccgtcgcctgagc
ccggacgagatcgcccggtacctgttccggcgcgtggtctcctgggggcgcagctcgaac
gtcttcctgcagaacggctcgcgcctgtacctcgatgtgggcagccaccccgagtacgcg
accgccgagtgcgattcgatcctgcagctcgtcacgcacgacaaggcgggggagcgggtg
ctcgaggacctgctcctcgacgccgagcagcgcctgcaggacgagggcatcggcggcgac
atctacctgttcaagaacaacaccgactcggccggcaactcctacggctgccacgagaac
tacctggtgagccgggtgggagagttctcccgcatcgccgacgtactgctgccgttcctg
gtgacccgccagctcatctgcggcgcgggcaaggtgctgctcacgccgaagaacgcgacg
tactgcctgagccagcgcgccgaacacatctgggagggcgtctcgagcgccaccacccgc
agccggcccatcatcaacacccgcgacgagccgcacgccgatgcggagaagtaccgccgg
ttgcacgtgatcgtcggcgactcgaacatgtccgagaccaccaccatgctcaaggtgggc
accgcgcacctggtgctggagatgatcgaggccggcgtgcagttccgcgacttctcgctc
gacaacccgatccgggcgatccgcgaggtcagccacgacaccaccgggcggcacgaggtg
cgcctggccggcggtcgccaggcgggggcgctcgacatccagcgcgagtactacaccaag
gccgtcgactacctggccacgcgcgagcccgacgcgcagctcgcccaggtcgtggatctg
tggggacgcacgctggacgccgtcgaatcgcaggacttctccggcgtggacaccgagatc
gactgggtgatcaagcgcaagctcttccagcgctacctggacaagtactcgatggacctg
gccgatccgaagatcgcccagctcgatctcgcgtaccacgacatcaagcgcggccgcggc
gtcttcgacgtgctgcagcgccggggcatggcagcgcgcgtcaccaccgacgaggcgatc
gacgaggccgtgaagacgccgccgcagacgacgcgggcgaagctgcgcggcgacttcatc
accgccgcgcaggcggccggccgggacttcaccgtcgactgggtgcacctcaagctcaac
gaccaggcgcagcgcacggtgctgtgcaaggacccgttccgcaacgtcgacgagcgggtg
gagcgcctgatcgcgtcgatgtga
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