Truepera radiovictrix: Trad_2010
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Entry
Trad_2010 CDS
T01254
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tra
Truepera radiovictrix
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tra03009
]
Trad_2010
Enzymes [BR:
tra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Trad_2010
Ribosome biogenesis [BR:
tra03009
]
Prokaryotic type
ribosomal protein modification factors
Trad_2010
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ADI15124
UniProt:
D7CQZ0
LinkDB
All DBs
Position
2168563..2169915
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AA seq
450 aa
AA seq
DB search
MSGKVGFVSLGCPKALVDSERILTQLRAEGYRVVPSYDEAEVVVVNTCGFITPAVEESLN
AIGEALAHTGKVIVTGCLGERPEKIMARHPSVLAVTGQADVAGVMAAVHRVLPPDDNPFT
SLVPPQGVKLTPRHYSYLKIAEGCNHKCAFCIIPQLRGLQVSRDAGEVLYEAYRLVASGT
KELLVIAQDSSAYGVDLRHRESAFQGRQVAAHLVPLVRELSDMGAWVRLHYVYPYPHVRE
LIPLMAEGKLLPYLDVPLQHASPKVLRAMRRPGGAESHLKTIRAWRAVCPELAIRSTFIV
GFPGETEEDFEQLLDFLQEARLERVGAFTYSEVPGAVANGFPDQVPEAVKQERFDRLMAV
QQRISLEKNQAKVGRVLEVIVDDYGELPGEVVGRTKADAPGIDGTVLATGDGTTKIGDIV
RVKVTGATAYDLSGEVVSQVPWRPNVLTLA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaaagtcggttttgtaagtctgggctgccccaaagccctggtggattccgag
cgcatcttgacgcagctgcgcgccgaagggtaccgcgtggtgccgagctacgacgaggcc
gaggtggtggtggtcaacacctgcggctttatcaccccggcggtcgaggagtcgttaaac
gccattggagaggctttagcgcacaccggcaaggtgatcgtcacgggctgtttgggcgag
cgccccgaaaagatcatggcgcggcacccgagcgtgctggcggtgacgggccaagcggac
gtcgcgggcgtgatggcggccgtgcaccgggtcctgccccccgatgacaatccctttacc
agcctcgtgccgcctcagggggtcaaactcaccccgcgccactactcgtacctcaagatc
gccgagggctgcaaccacaagtgcgcgttttgcatcatcccgcagcttcgcgggctgcag
gtgtcgcgcgacgcgggcgaggtgctctacgaagcgtaccgcctggtcgcgagcggcacc
aaagagctcttggtgatcgcccaggacagcagcgcctacggcgtagacctccggcaccgc
gagagcgcgtttcaggggcggcaggtcgcggcgcacctcgtaccgctcgtccgggagctc
tcggacatgggcgcgtgggtgcggctgcactacgtctacccctacccgcacgtgcgcgag
ctcatccccttgatggccgaggggaagctgctcccctacctcgacgtgcccctgcagcac
gcctcgccgaaggtgctgagagcgatgcggcggcccggcggcgccgagagccacctcaag
accatccgggcgtggcgcgcggtctgtccagagctcgccatccgctcgacgtttatcgtc
ggcttccccggcgagacggaggaggacttcgagcagcttctggactttttgcaagaggcg
cggctcgagcgcgtcggcgcctttacctatagcgaggtgcccggcgcagtcgccaacggc
ttcccggaccaggtacccgaagcggtcaaacaggagcggttcgaccggctcatggcggtg
cagcagcgcatcagcttggagaaaaaccaggcgaaggtcggtcgggtgctcgaggttatc
gtcgacgactacggcgagctgccgggcgaggtcgtcggccgcaccaaagccgacgccccc
ggcatcgacggcaccgtgctcgctacgggcgacgggacgaccaagatcggcgacatcgtg
agggtcaaggtgaccggcgcgaccgcctatgacctctcgggcgaggtcgtctcgcaggtc
ccgtggcggccgaacgtgctgacgctggcctaa
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