Trichoderma reesei QM6a: TRIREDRAFT_23190
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Entry
TRIREDRAFT_23190 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRIREDRAFT_23190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_23190
Enzymes [BR:
tre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
TRIREDRAFT_23190
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
TRIREDRAFT_23190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
ATP_bind_1
nSTAND3
KTI12
SRPRB
MobB
CbiA
MMR_HSR1
FeoB_N
AAA_30
AAA_22
AAA
AAA_18
DAP3
IstB_IS21
AAA_35
TniB
MeaB
T2SSE
AAA_33
AAA_28
ABC_tran
ATPase_2
AAA_24
NTPase_1
AAA_7
SRP54
cobW
FtsK_SpoIIIE
RuvB_N
AAA_14
AAA_19
AAA_29
AAA_5
G-alpha
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
18484243
NCBI-ProteinID:
XP_006968570
JGI:
Trire2_23190
UniProt:
G0RTW5
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MSIPGLGQIPVQAAVSSTRTISLRPAWEWRFQVPAGGSITVKVLSGTAEKDGVELPLRNA
YTFSGIKSKILTWHGCELEVEGRCDRDSVAEYPNPVANPATSHINLHARLSDMRVDATRQ
RREGPRVLVVGPPNSGKTTLVKTLTSYATRQGYQVITVNADPREGMLSLAGTLSASVFAT
VMDPEAVDGWGSTPTSGPSTVPVKLPMVFHYGRESPEEDEDFYRELVARLAGAVSGRLSE
DEEVRGSGVIVDSMGISEGGQVGMDLVAHIVDEFSINIVVVIGSPKIHADLTTRFASEKT
SLGEQIQVVALDKSDGVVERDEAFLQHSREAVIKEYFFGDAKRTLSPQIQQVDFDALTIY
KLADYSPDEKQSLVTEEPSSLMQHWTFAVMNASVRDSPDVVRAASVLGFVYVADVDEDRR
KIKILAPVSGRLGDRPLVWGRWPEPYINLLG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcccggccttgggcagatcccggtacaggcggccgtttcctcgacgcgaacc
atctccctccgcccggcgtgggaatggcgattccaggtgcccgctggcggctccatcacc
gtcaaggtgctctccggcaccgctgaaaaggacggcgtcgagctgccgctgcgcaatgcc
tacaccttctccggcatcaagtccaagatcctcacctggcacggctgcgagctggaggtg
gagggccgatgcgaccgcgactccgtggccgagtaccctaacccggtcgccaatccggcc
acttcacacatcaacctgcatgcgcggctgagcgacatgcgcgtcgacgccacacggcag
cggcgggagggccccagagtgctggttgtcgggccgcccaactcgggcaagacgacgctg
gtcaagacgctgacgagctatgccacgcgccagggataccaggtgattacggtcaatgcg
gatcccagggagggcatgctgagcctggcggggacgctgagcgcgagcgtctttgcgacg
gtcatggaccccgaggcggtggacggctgggggtcgacgccgacgagcgggccgagcacg
gtgcccgtgaagctgcccatggtgtttcactacgggagggagtcgccggaggaggacgag
gacttttaccgcgagctcgtggcgaggctggcgggggccgtgagtgggcggctgagcgag
gatgaggaggtccggggctcgggggtgattgtggacagcatgggcatcagcgagggtggg
caggtcggaatggatctggttgcgcatatcgtcgatgaattttccatcaacatagtggtg
gtcattggatcgcccaagatccatgccgaccttacgacccggtttgcgagcgaaaagacg
agccttggggaacaaatacaggtggttgcgctggacaaatcagatggcgtcgtcgagagg
gacgaggcctttctgcagcactctcgcgaggctgttatcaaagaatacttttttggggac
gcaaagaggacgctgagtccgcagattcagcaggttgatttcgacgccctgaccatttac
aagctggcagactattcacccgatgagaagcagagcttggtgacggaagagccgtcatcg
ctcatgcagcactggacctttgcggtgatgaacgcctcggtgcgtgacagtccggacgtg
gtgcgcgcggccagcgtgctgggctttgtatacgtggccgacgtcgacgaggacaggcgc
aagattaagattttggccccggtgagcgggaggctgggggacaggccgctggtctggggg
cggtggccggagccgtacattaatctgttgggatag
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