KEGG   Trichoderma reesei QM6a: TRIREDRAFT_3779
Entry
TRIREDRAFT_3779   CDS       T02991                                 
Name
(RefSeq) DNA polymerase epsilon, catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03030  DNA replication
tre03410  Base excision repair
tre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRIREDRAFT_3779
   03410 Base excision repair
    TRIREDRAFT_3779
   03420 Nucleotide excision repair
    TRIREDRAFT_3779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tre03032]
    TRIREDRAFT_3779
   03400 DNA repair and recombination proteins [BR:tre03400]
    TRIREDRAFT_3779
Enzymes [BR:tre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TRIREDRAFT_3779
DNA replication proteins [BR:tre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    TRIREDRAFT_3779
DNA repair and recombination proteins [BR:tre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      TRIREDRAFT_3779
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 DUF2018
Other DBs
NCBI-GeneID: 18484705
NCBI-ProteinID: XP_006964819
JGI: Trire2_3779
UniProt: G0RI13
LinkDB
Position
Unknown
AA seq 2228 aa
MPNTSLRRPTKGYKRGGKAAYHGVKTRTFAASSRAEGTSADEKWERTRLAQSIDDRMGFA
RYESGKKKEGWLVNVQPTSVEDERIPGGRAALDCYFIELDGSTFKATVEYDPYFIIAVKK
GRESEVEEWVKRVPGGGVVKAIRRIEKEDLSMPNHLMGYRRTFIELRFANVNDLMAARRD
ILPIAEKNKKNMNAMDAYAEVATNNGNFDLFDNDLRDDERNTSTSISEASDFIVDIREYD
VPYHVRVMIDLDIRVGKWYFVEAKHGVTKVTVNEGRSLPADPVVMAYDIETSKLPLKFPD
AATDQIMMISYMIDGQGFLITNREIISEDIGDFDYTPKPEYPGPFMIFNEPDEKSVIERF
FLHIKEARPTVIATYNGDFFDWPFVEARASVNGIDMYHEIGWKKDSEDQYKCSYSVHMDC
FHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATY
YLYMKYVHPFIFSLCTILPLGADDVLRKGTGTLCEMLLMVQAYQQEIVLPNKHITPKEAF
WDGHLLDSETYVGGHVESIEAGVFRSDIPVNFAVDPGAVDELLRDLDNALKFVITVEEKK
SLDDVTNYDEVKQQIMSKLLNLKETPNRNERPLIYHLDVASMYPNIMTTNRLQPDSMISE
SDCAACDFNRPGKTCDRRLPWAWRGEYIPAKRDEYNMIRHALENEKFPGKTPKAPPRTFQ
QLSADEQASLVRKRLQLYSQKVYHKIHDSTTIIREAIICQRENPFYINTVRDFRDRRYDY
KGKAKVWKGKTDALKASGAPSSEIEDAKKMSIVYDSLQLAHKVILNSFYGYVMRKGSRWY
SMEMAGVTCLTGATIIQLARQLVERLGRPLELDTDGIWCMLPATFPENFAFKLKNGKKMN
ISYPCVMLNHLVHDKFTNHQYQTLVDPKTFRYETHSDNSIFFEVDGPYKAMILPTSKEED
KNLKKRYAVFNDDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGEDLTQCYTAVAKV
ANQWLDVLHNKGSTLADEELMELISENRSMSKTLEEYGSQKSTSITTARRLADFLGEQMV
KDKGLNCKFIICSRPRNAPVTERAVPVAIFSAEETVKRAYLKKWLKEEPADTDPRALLDW
DYYLERLGSVIQKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKMKQKKLTDLFSSK
EPLADITNINGPRAEDMEDFGSKLLKPKQLGALIASSQVQAPSSQKRKSPEPAEEPNPIA
TLPDAMPDPSDDYVGFLQYQKKKWKLQKQARIRRRQLFGERRGNVSSNIQQTFMKQAHLT
FMNTWQLLHLKATDTPGIVTAHVLIDAKIHTLKINVPRQVFLNLKKEELPDVEIAGCEVE
QVNYTLPNGHESKHLFKLTVPEDVYFNEAEKFSLLFNHPSVEGVYEKQVPLNIRAVLRLG
NLCTIDEEQEAVLGKGLEQGFDLMGLKRPAKPKAYLESSPLAYIYISHITAGDRQIFGLF
STTNDQAYVVILQKGRDSGSDLPNITKLYSELLAKRAEEAAGTNWQDCFKYQEKITFKVT
QVTIRRKAHLEVADVVRKLRKDESRPQMMVIQSSQRNLLVHDIPILGEFPVLPLRYDASD
SSLPPLGWQAVVARRLVGHYLGLGSWILHLTALARYGDVPLCNLERDDPRFLIDIAYARR
LQANGVVLWWSPDPRPDHAGYEKDDITGSLDTVKMPSINNPGTFSSVCIDLDVRNLAINT
ILTSSLINELEGAESISFNPTADGSEILASENGFANAGVLVLREMVKAWWAEACKGSTMA
DVLVQHLVRWVENPDSFMYDRALHYYVQMMSRKAFQQLMADFRRVGSQVIFASANRLILQ
TTKAEVGNAFAYSQYIIKSIKSKSLFHFIDLEIKEYWDYLVWYDEFNYGGKACQQVADSD
EQNLETIMHWQMATFLPLRLQPIFQDWVIEFIQLMHKLKRPENNDPDSTPRLTQLPNRNQ
DLDGDTQIILGKAFEKPFKKVIVGLINQQKRELLHPELAEDYSFPSLPGSHLQLRNPILE
LVKSIMQVLSLDKNITLEARLLRKELLALFEIREFSKEGTFTNPSESLKLLQVSCDSCTM
ARDLDFCRDEDLIGAPGDNNNNGGGGGGGQSWQCGFCGSEFDRVGLEERLLAMVEGWATE
WAVQDLKCERCGALRVNDFMEHCTCSGGWKEVLSREEVVRKLGVMRRVARYYGLKMLGNV
VEGLYEGL
NT seq 6687 nt   +upstreamnt  +downstreamnt
atgccaaacacatctcttcggcgcccgacaaagggctataagcgagggggcaaagctgca
tatcatggcgtcaaaacccggacattcgctgcgtcctcgagggccgaaggcacctctgcc
gacgagaagtgggagcgcacccgcctggcccagagcatcgacgacagaatgggctttgcc
cggtacgagagcggcaagaagaaggaagggtggctggtcaacgttcagcccacctctgtc
gaagacgagaggataccgggcggccgagcggcgctggactgctacttcatcgagctcgac
ggaagcaccttcaaagctacggttgaatatgacccctacttcatcattgcggtgaaaaag
ggccgcgagtctgaagtcgaagagtgggtgaagagggtacccggcggaggcgttgtgaaa
gcaatcaggaggatagagaaggaagatctcagcatgccgaatcacctgatgggctaccga
cgcacattcattgagctcagatttgccaatgtcaacgacctgatggccgcgagaagagac
atcttgccgattgcggagaagaacaagaagaacatgaatgccatggacgcctatgccgag
gttgccacgaacaatggcaactttgatcttttcgataacgatttacgagatgacgagcga
aacacgagtacttccatttctgaagcgagcgacttcatcgtcgacattcgcgaatacgat
gttccataccacgttagagtaatgatagacctagacataagagtgggcaagtggtatttt
gtcgaagcaaagcatggcgttacgaaagtcacagtaaacgagggccgatctttgccagcc
gacccggtggtcatggcgtacgatatcgagacatcaaagctgcccttgaagttccccgat
gccgcaaccgatcagattatgatgatctcatacatgattgacggccaaggattcctaatc
accaaccgagaaatcatttccgaagacattggcgactttgactatacaccaaagcccgag
taccccggcccctttatgatcttcaacgagccagacgaaaagtctgtcattgagagattc
tttctccacatcaaggaggctcgcccgactgtcattgcgacgtacaacggtgacttcttc
gattggccctttgtcgaggcgagggcgagcgtcaacggcatcgacatgtaccatgagatt
ggctggaaaaaggacagcgaagaccagtacaagtgcagctacagtgttcacatggactgc
tttcattgggtcaaccgagactcctatctgccgcaaggatctcgaggcttgaaggccgtc
acagtcgccaagctgggatacgaccccgatgaactcgacccggaattgatgactccatat
gcatcagaaagaccacaaacgctcgcagaatactcagtctccgatgccgtggcaacctac
tacctgtacatgaaatatgtgcaccccttcatcttctcactctgtacgattctgcctcta
ggagcagatgacgtcctcagaaagggtacgggtacgctctgtgaaatgcttctgatggtg
caggcgtaccagcaggagattgtgctgccgaataagcacatcaccccgaaagaagcattc
tgggacggccatctcctcgattccgagacatatgtcggcggccacgtcgagagtatcgaa
gccggcgtttttcggtctgacatccccgtcaactttgcggttgaccccggcgcagtggac
gagcttttgcgagatctggacaatgcgctcaagtttgtcattacagtggaagagaagaag
tctctcgacgacgtcaccaactatgatgaagtcaagcagcagatcatgagcaagcttttg
aatctcaaagagacgcccaatcgcaacgagagaccactcatttaccatttggatgtcgcc
tccatgtatccgaatatcatgacgacaaacagattgcagccggactcgatgatttcagaa
tcagattgcgctgcctgtgatttcaaccgtccaggcaagacttgtgatcgacgattgcct
tgggcttggagaggagagtacataccggcgaagagagacgagtacaacatgatcaggcat
gctctggagaacgaaaagttccctggcaaaacaccaaaggcaccccctaggacatttcag
cagctgagtgctgatgaacaggcgagcctggtaaggaaacgtctccagctctactcccag
aaggtatatcacaagatccacgactctactacaatcatccgggaggcaatcatttgtcag
cgagaaaaccctttctacatcaacactgtccgcgacttccgtgatcgtcgatacgactac
aagggtaaggcaaaggtctggaaaggcaagacggatgcgctgaaggcatctggtgccccc
agcagtgagattgaggatgcgaagaagatgagtattgtgtacgactctctgcagcttgcg
cacaaggtcatcttgaattctttttacggatacgtcatgaggaaaggctctcgctggtat
tccatggagatggcgggtgttacctgcttaacgggagccacgatcattcagcttgctcgt
cagcttgtcgaacgcctcggccgtcctcttgagctggacaccgacggaatttggtgtatg
cttccggcgaccttcccggagaactttgcctttaagctcaagaacgggaagaagatgaac
atttcctacccctgcgtcatgctcaaccatctcgtgcatgacaaatttaccaaccaccag
tatcagacattggtcgaccccaaaaccttcagatacgaaactcacagcgacaactccatc
ttctttgaagtcgatgggccgtacaaggccatgatcttgcccacgtcaaaagaagaagac
aagaacttgaagaagagatatgccgtgttcaacgacgatggcagtctggcagagctgaag
ggctttgaagtgaagcgtcgtggtgagctcaagctaatcaagatcttccagcaacagatc
ttcaagttcttcctcgaaggagaagacttgacgcaatgctacactgctgtggcaaaagtt
gcaaaccagtggctcgatgtactgcacaacaagggatctacgcttgcagacgaagagctg
atggagctaatttccgaaaatcgaagcatgtccaagaccctcgaggagtacggcagtcaa
aagtcgaccagtatcacaacagcacgtcgtcttgccgacttcttgggcgagcagatggtc
aaggacaagggattgaactgcaagttcatcatttgctctcgacctcgaaatgcacccgtc
acggagcgtgccgttcctgtcgccatcttctctgcagaagagactgtgaagcgcgcctat
ctcaagaagtggctcaaggaggagcctgcagatacggacccccgggctttgctggactgg
gattactacctggagcgtcttggctccgtcattcagaaactcatcaccatccctgccgcc
ctgcagaaagtgcgcaatcccgtacctcgagtgcctcatcccgactggctccagcgaaga
atcaacatcaaggatgacaagatgaagcagaagaaactcacggatctctttagcagcaaa
gagccgctggcagatattacgaatattaacgggccccgcgcggaggacatggaggacttt
ggctccaagctgctgaaacccaagcagctcggggcactcatcgcgtcttcgcaggtacag
gccccctcctcccagaaacgcaagtctcccgagccggcagaggagccaaaccccattgcc
actttgccagacgccatgcccgatccatcggacgactatgttggatttctgcagtatcag
aagaagaagtggaagctgcagaaacaggcacgtattcgcagaaggcagctgtttggtgaa
aggagaggcaacgtcagcagcaacatccagcagacgttcatgaagcaagctcacttgacg
tttatgaatacgtggcagctgcttcatctcaaagccactgatactcccggcatcgtgacg
gcgcacgtcttgattgacgcaaagatccacacgctgaaaatcaacgtcccccgccaggtc
ttcctcaatctcaagaaagaagagctgccagacgttgaaattgcggggtgcgaggtcgaa
caagtcaactatactctccccaacggccacgagtctaagcatctcttcaagctcaccgtc
cccgaagacgtgtactttaacgaagcagaaaagttttcgctcttgttcaaccatcctagt
gtagagggtgtgtatgagaagcaagtgcccctgaacatccgtgcagtgctacggctgggt
aacctctgtaccattgacgaggaacaagaggcagtgcttggcaaaggtctcgagcaaggc
ttcgacctgatgggtctgaaacgccctgcaaaaccgaaggcttatttggagtcgtctccc
ttggcttacatctacatctcgcacattactgcaggagatcgtcaaatctttggtctgttc
tcgacgacaaacgaccaagcttacgtcgtgatactgcagaaaggacgggattcgggatca
gatctgccaaacataaccaagttgtactcggaactgctggcaaagagagcagaggaggcc
gcgggaacgaactggcaggactgcttcaagtatcaggagaaaatcaccttcaaagtcaca
caggtgacgatacggcgcaaggctcatttagaggttgccgatgtggtccgaaagctccgc
aaagacgagtcacggccgcaaatgatggttatccagtcgtctcagcgaaaccttcttgtc
cacgacattccgattctgggcgagttcccggtgttgccgctgagatacgatgcctctgac
agctcattaccgcctcttggctggcaggcggttgttgcacggcgcttggtcgggcattat
ctggggctgggatcctggatcttgcacctcacggccctggcgcgctacggcgatgtgccc
ctgtgcaacttggagcgtgacgatccccggttcctcatcgacattgcatacgccagacgg
ctacaggcaaacggggtcgtgctgtggtggtctcctgatccccggcctgaccatgctggc
tatgagaaggacgatatcaccgggtctcttgacactgtcaagatgcctagcatcaataac
cccgggacgttttcgtctgtctgcattgacctagatgttcgcaacctcgccatcaacacg
atactgacctcatccctaatcaacgagctcgaaggggctgaatccatttcgttcaaccct
actgccgacggatcggagattctggcctcagagaacggattcgccaatgccggagtgctg
gtccttcgcgagatggtcaaagcatggtgggcagaagcttgcaagggcagtacaatggcc
gatgtgctcgttcagcatctcgtccgctgggtcgaaaacccggattcgttcatgtacgac
cgagcactgcactactatgtgcagatgatgtcgcggaaggcgttccagcagctcatggcg
gactttaggcgtgtcggctcgcaggtcatctttgcgagtgcaaaccgattgattctgcag
acgaccaaggcagaggtcggcaacgcctttgcttacagccagtacattatcaagtccatc
aagagcaagtcgctattccacttcatcgacctggaaatcaaggagtactgggattatctg
gtgtggtacgacgagttcaactacggtggaaaagcctgccagcaggttgccgactccgac
gagcagaatctggagacgattatgcactggcaaatggccacgttcttgcctcttcggctg
cagcccatcttccaggattgggtgattgagttcatccagctcatgcataagctcaaacgc
ccagagaacaatgatcccgactcaactccgcgcctcactcagctaccgaacaggaatcaa
gatctcgacggcgacacgcaaatcatcctgggcaaggcctttgaaaagccgttcaaaaag
gtcattgtcggcctgatcaaccagcagaagcgcgagctcctgcatccggagctggcggaa
gactatagcttcccctcgttgcccggttcgcacctccagctgcgcaatccgatcctcgag
ctcgtcaagtccatcatgcaggtcctctccctggacaagaacattacgctcgaagcaaga
ctgctgcgcaaagaactgctcgcgctgtttgagatacgcgagttctccaaggagggcacc
tttacgaatccttcggagagtttgaagctgctgcaggtctcctgcgacagctgcaccatg
gcgcgagacctcgacttctgccgcgacgaggacctgattggcgctcccggcgacaacaac
aacaacggcggcggcggcggcggcggccagagctggcagtgcggcttctgcggcagcgag
ttcgacagggtgggcctcgaggagcggctgctggccatggtggagggctgggcgacggaa
tgggccgtgcaggacctcaagtgcgagcggtgcggcgcgctgagggtcaacgacttcatg
gagcactgcacctgcagcggggggtggaaggaggtgttgtcgagggaggaggtggtgcgg
aagctgggtgtgatgaggagggtggcgaggtattatgggctgaagatgcttgggaatgtg
gtcgaggggctttacgaggggttgtga

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