Trichoderma reesei QM6a: TRIREDRAFT_62301
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Entry
TRIREDRAFT_62301 CDS
T02991
Name
(RefSeq) DNA repair protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRIREDRAFT_62301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_62301
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRIREDRAFT_62301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_21
DUF6549
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
18486897
NCBI-ProteinID:
XP_006965845
JGI:
Trire2_62301
UniProt:
G0RKM4
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MPSDKAAAAARTPAKAARPAAAAASSTKQKSIMSFFQKSSPVPAPSAPREKVSSDHQHSS
PLKETKANSLPKAKPSTKLSTPLPSSDAPEPPSSQENMESTAKRTTSRSIKASDSDMAPS
SPVRKGKRAINYAESSDEDEPFAYGAASQARRRGRARNNVVEDEDEYGGSETAGQEEEDD
MDDFVVSDESDGETARSKKRKRPSKPSSARKRTNLLPSAKEDTVQITTTLDDMDLDDLPA
TSTAKQWSYDPDSTEKQPVVTPADRVVTKDPKVKEKAYMKEPDERYPWLANIRDKEKRPP
TDPDYDPRTIFIPPGAWAKFSPFEKQYWEIKQDLWDTIVFFKKGKFYELYEKDATIGHQE
FDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETNLGKEMRERQDKSGKKA
DKVISRKLGCILTAGTLVDGSMLQDDMAAYCVAIKESVVDDLPAFGIAFTDTATGKFFLS
GFVDDVDRTKFETLIAQIGPRELLLEKSGLSTKSLRILKNNTSPTTIWTHLKPGTEFWDA
DTSRRELSCGKYFLKAEGEEEEVWPEALQELKDNDLVMSAIGGLVSYLRFLKLEAPLLSQ
GNFEVYKPIQKNGTLVLDGQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQWV
AHPLCDIARINERLDAVELLNDDPSVREQFASQLVKMPDLERLISRIHAGACKPEDFVRV
LEGFEQIEYTMTLVGAFKGGNGLLDRLISSMPNLEEPLAYWSTAFDRRRAKEEKLMIPES
GVDEDFDASVARIEEIKSQLDDLLAEKKTELKCKTLKFTDIGKEIYQIEAPKSVKIPSSW
RQMSATKDVKRWYFTELTTLVRELQEAEETHSQLIREVASRFCKKFDVDYETWLKAIKII
AQLDCLVSLAKASMSLGEPSCRPQFVEEERSVLEFEELRHPCMINTVDDFIPNDIKLGGD
QAKINLLTGANAAGKSTVLRMSCIAVIMAQVGCFVPARSARLTPVDRIMSRLGANDNIFA
AQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCIGFF
ATHYHSLATEFENHPEIRARRMQIHVDDAQRRITFLYKLEDGVAEGSFGMHCAAMCGISD
RVIKRAEIAAKEWEHTSRLKDSLDKAKTGCYIPLGILSDVGSLLGDKGDVGAQGVDVLLR
AIESL
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgacaaggcagcggccgctgctcgcacgccagcaaaggccgcccggccagct
gcggcagccgcctcctcgaccaagcagaaatccatcatgtccttcttccaaaagtcgtcg
cccgtcccggcgccctccgcaccccgcgaaaaggtctcgtccgatcaccagcactcctcc
cctctcaaagagacaaaggccaactctctgcccaaggcgaagccctccacaaagctctcc
accccgctgccctccagcgatgcgccagagcccccgagctcgcaggagaacatggagtcg
accgccaagcggaccacgagcaggtctatcaaggcctcggatagcgacatggcgcccagc
agcccagttagaaaggggaaaagggccatcaactatgccgagtcctcggatgaggatgaa
cccttcgcctacggagcggcttcgcaggctcggcggcgtggtagggcccgcaacaatgtt
gtcgaagacgaagatgaatacggtggaagcgagacggctgggcaagaggaagaggatgac
atggacgactttgttgtatcagatgaatctgacggagagactgctcgatccaaaaagagg
aagcgcccgtcaaaaccctcgtcggcgcgcaaacgcaccaatcttttgccctccgccaaa
gaagatacggtgcaaatcacgacgactctcgacgatatggatctagatgaccttcccgcc
acctccacagcgaagcaatggtcctacgatccagactctaccgaaaagcagcccgtcgtc
acaccggcggatcgagtcgtgaccaaagatcccaaggtgaaggaaaaggcgtacatgaag
gagccggacgagcgttatccttggctcgctaatattcgagacaaggagaagcgtccgccc
acggatccggattatgacccccgtaccatcttcattccgccaggcgcctgggccaagttt
tccccctttgagaagcagtactgggagattaagcaagacctctgggacacaatcgtcttc
ttcaaaaagggcaagttctacgagctttacgaaaaagacgcaaccattggccaccaggag
tttgacttcaagatgacggatcgagtcaacatgcgcatggtcggtgttcctgagggttcc
cttgaccattgggtcaaccagttcatcgccaagcagtacaaggtggcccgtgtagagcag
atggagaccaacctgggcaaggagatgcgagaacggcaagacaagagcggcaaaaaggct
gacaaggtcatctctcgaaagctgggctgcatcctgacggctggaaccctggttgatggc
agcatgcttcaggacgacatggccgcttactgcgtcgccatcaaggaatccgtggtggat
gacttgccagcctttggcatcgccttcaccgatactgccactggcaaattctttctctct
ggcttcgtggacgatgttgatcggaccaagtttgaaacattgattgctcagattggccct
cgcgagcttctactcgaaaagtccggcctgtccacaaagtctcttcgcatcctcaagaat
aacacgagccctaccaccatctggactcatctgaaaccaggcacagaattctgggatgcc
gacacctctagacgagagctctcctgtggcaagtactttctcaaagcggaaggcgaagaa
gaagaagtctggccagaagccctccaggaactcaaagacaacgatctcgtcatgtctgcc
attggtgggcttgtctcctatctccgattcctcaagctggaagcccctctattatctcag
ggcaactttgaggtgtacaaacccatccaaaagaacggcacccttgttttggatggccag
actctgaccaatctggagctgttctcaaacactgttaatggcaacactgatggcaccctg
tttggtctacttaataagtgcatcactccctttggcaagcgtctgtttcgccagtgggtt
gctcacccgctgtgtgacattgcccgtatcaacgagcgtctggacgccgtcgagctgctg
aatgacgatccttctgttcgcgagcagtttgcctcccagctcgtcaagatgccggatctc
gagcgactcatttcgcgcatccacgccggtgcctgcaaacctgaggactttgtccgcgtc
cttgagggcttcgagcaaatcgagtacacaatgactcttgttggtgccttcaagggtggg
aatggcctgcttgatcggctgatctcatccatgcccaacctcgaggagccgctggcttac
tggagcacggcattcgatcgacggagagccaaggaggagaagctgatgattccagaaagc
ggcgtagatgaagactttgacgccagtgtggctcgaatcgaagagatcaagagtcagttg
gacgatctgctggctgaaaagaagacggagctcaagtgcaaaaccctcaagtttaccgat
atcggcaaagaaatttaccaaatcgaagcgcccaagagtgtcaagatcccttccagctgg
cgtcaaatgtctgcgaccaaggacgtcaagcgctggtactttaccgagctcaccactctt
gtccgagagctccaagaagccgaggagactcactcgcagctcatccgggaagtcgcgtcg
cgcttctgcaagaagtttgacgtggactacgagacgtggttgaaagccatcaaaatcatt
gcccagctggactgtctggtcagccttgccaaggcatccatgtcgcttggagagcccagc
tgcaggccgcagtttgtcgaggaggagcgcagcgtcttggagttcgaggagctgagacat
ccctgcatgattaacacggttgatgactttattcccaacgacatcaagctcggtggtgac
caggccaagattaaccttctgaccggtgccaacgcagccggcaagtcgacggtcctgcga
atgtcgtgcattgccgtcatcatggcccaggttggctgcttcgttccggccaggtcagct
cgccttacccccgtggaccgcatcatgtcccgtttgggagccaacgacaacatctttgcc
gcgcaatccaccttcttcgtggaactctccgagaccaagaagattctcgccgaggccact
ccccgctcactcgtcatcctcgacgaactgggtcgaggaacgagctcatacgatggtgtc
gctgtcgcacaagccgtcctgcatcatgtagcaacccacatcggctgcatcggcttcttc
gcaacgcactaccactccctcgccaccgagtttgagaaccatcccgagattcgcgctcgc
cgcatgcagatccacgtcgacgacgcacagcgccgcatcaccttcctgtacaagctggag
gatggcgtcgccgagggcagtttcggcatgcactgcgccgccatgtgcggcatctcggac
cgcgtcattaagagagctgagattgccgcaaaggaatgggagcacaccagccggctcaag
gacagcctcgacaaggccaagacggggtgctacattccgctgggcattcttagcgacgtc
ggttcgctgctcggggacaagggggacgtgggggcccagggggtggacgtgttgctcagg
gccattgagagcctgtga
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integrated database retrieval system