Trichoderma reesei QM6a: TRIREDRAFT_63547
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Entry
TRIREDRAFT_63547 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03020
RNA polymerase
tre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRIREDRAFT_63547
09124 Replication and repair
03420 Nucleotide excision repair
TRIREDRAFT_63547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tre03021
]
TRIREDRAFT_63547
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_63547
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_63547
Transcription machinery [BR:
tre03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
TRIREDRAFT_63547
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRIREDRAFT_63547
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TRIREDRAFT_63547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
18487061
NCBI-ProteinID:
XP_006966275
JGI:
Trire2_63547
UniProt:
G0RMB4
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MFFLYNMERRVTLHPSYFGRNMHELVTSKLLKDVEGTCAGSYYIISIMDTFDISEGKILP
GNGLAEFTVGYRAVVWRPFKGETVDAVVYSINPQGFFAQAGPLRLFVSAHLIPSDIKWDP
NATPPQFTNNEDTVIEPGTHVRVKIIGTRTEVGEMWAIGSIKEDYLGYAG
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctctacaacatggagcgcagggtgaccctgcatccgtcctacttcggccgc
aacatgcacgagcttgttactagcaagctgctgaaagatgtcgaaggcacctgcgccggc
agctactacatcatctccatcatggacacgtttgacatttccgaaggcaagatcttgcca
ggcaacggacttgcagagtttacggttggctaccgtgccgtcgtgtggcggccgttcaaa
ggagagacggttgatgccgttgtctactccatcaatccgcagggtttcttcgcccaggcc
ggcccgctcagactctttgtgtctgcccatctgatacctagcgacatcaaatgggatccc
aacgcgaccccccctcaatttaccaacaacgaagacaccgtcatcgagccgggcacgcat
gtgcgcgtcaagattattggcacgcgaacagaagtcggcgaaatgtgggccattggaagc
atcaaggaggactacctagggtatgctggatga
DBGET
integrated database retrieval system