Talaromyces rugulosus: TRUGW13939_06477
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Entry
TRUGW13939_06477 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRUGW13939_06477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_06477
Enzymes [BR:
trg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TRUGW13939_06477
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
TRUGW13939_06477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
BA14K
Motif
Other DBs
NCBI-GeneID:
55993972
NCBI-ProteinID:
XP_035345521
LinkDB
All DBs
Position
III:join(4907895..4908410,4908509..4910948,4911005..4911810)
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AA seq
1253 aa
AA seq
DB search
MAPSATNTDWTVGFDTLRREKLFKNPPKDRSAYPLLDAAVRPHIDSFNALFGDNKIIEEA
LKDVGTKTFIDGENESPEVRQARLARGDPPPHRNRLNVRITEVFLDKAVLPPTNKFVPRN
GNTDYRTIYPAECRERHATYRGRLRARLQFQVNDGEWKESIREMGQLPLMLKSNRCHLEN
ATPQQLVDRKEESEELGGYFIVNGNEKLIRMLILPKRNYPLAIARPSFQNRGVGFTKFGI
QIRSVRPDQTSQTNVIHYLNDGNLTFRFSYRKQEYLVPVLMVLKALVETNDREIFEGIVG
GVSSNGIKNTFITDRVELLLRTYKGYKLHSRSEARAYLGKKFRPAILAPPHWTNEQCGTE
FLRKIVLPHLGNQSVTTSQDYDKFKMMMFMIRKLYAFVAGDCAADNPDAISSQEVLLGGF
LYGMILKERLEEWLLSFGKFTREWSTRGGNLKFTDPLFERDFLAKVVKRTNENVGGALEY
FLSTGNLVSPTGLDMQQASGYTVVAEKINFYRFIAHFRMIHRGSFFAQLKTTAVRKLLPE
SWGFLCPVHTPDGSPCGLLNHLAHKCLVATKDIDVSQIPRVLAQLGIRSDASADVNESVT
IQLNGRIVGYCSPKQAKMIHDTLRFWKVEGTHDIPKELEIGYVPNSNGGQYPGIYMFSQA
ARMYRPVKYLALDKLDYVGPFEQPFMEIACLDSDIRSGISTHIEFTPTNILSILANMTPF
SDNNQSPRNMYQCQMSKQTMGTPGTSVAYRTDNKLYRLQCGQTPIVRPPLYNSYGLDNFP
NGTNAVVAIISYTGYDMDDAMIINKSAHERGFGNGTIYKTKFYNLDDKDSRRAKSKREIS
KLFGFAPGSEIKAEWRNTLDEDGLPHAGVKVQEGTLIAAWHTVRFDPASDTYVNVDGQTH
FLKYKDTENGFVDTIRLVGNENGNEPLQAISIKYRIPRRPIIGDKFSSRHGQKGVCSQMW
PQIDMPFSETGIQPDLIINPHAFPSRMTIAQIIESMAGKAGTLHGHPQDCTPFQFSEENT
AADYFGHQLRKAGYNYHGNEPMYSGITGKEFAADIFLGVVHYQRLRHMVNDKFQVRTTGP
VNSVTGQPIKGRAKGGGIRVGEMERDSLLAHGCAFLLQDRLMNCSDSQRAWICRDCGSFL
STQVAVSSLGAHNASKLVANQGAIAAAAQVAPNQTTPVSGVGAVGGTNGIVRCRRCAREA
VFEDSRADIWEDGEGKRFVGGDSATVVVVPGVLRYLDAELAAMGIRLKFKVDH
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttcagcgacaaacaccgactggactgtcggcttcgacaccctcagacgagag
aaactgttcaagaacccgccaaaggaccgctctgcttatccattgctcgatgctgccgtg
cggcctcacattgactccttcaatgcgctcttcggcgacaacaagatcatcgaggaggcc
ttgaaggacgtgggcaccaagacatttatcgacggagaaaacgagagccccgaggtgagg
caagcgagattggccaggggcgacccgcctcctcatcggaatcgtctcaatgtgcgaatc
accgaggtcttcctggacaaggccgtccttcctcccaccaacaaatttgtgccccggaat
ggaaacacggactatcgtaccatctacccagccgaatgcagagaacgacatgcgacctac
cgaggccgattgcgcgccagacttcaatttcaagtgaacgatggtgaatggaaagagtcc
atccgggagatgggtcagcttcctttgatgttgaagtccaataggtgccacttggagaac
gcgactccgcagcagctagtagatcgcaaggaagagtctgaagaactgggtggatacttc
atcgtgaacggaaacgaaaagttgattcgaatgttgatcctgccgaagcgaaactatccc
ctggccattgctcgtccatcatttcaaaaccgtggcgtcggcttcaccaaattcggtatc
cagatccgatctgttcgaccagatcaaacttcgcagacaaacgttatccattatctgaac
gacggcaacttgacattccgcttctcctaccgcaagcaagagtacctggtcccagtcctc
atggttctcaaggccctcgttgaaaccaatgaccgcgagatctttgagggaattgtcggc
ggcgtctcgtctaatggtatcaagaataccttcattactgaccgtgtggaacttctgttg
agaacatacaagggctacaagcttcactcgcgatcagaggcaagggcctacctgggaaag
aagtttcgccctgcgattcttgctcctcctcattggacaaatgaacagtgcggaactgag
tttcttcgcaaaattgtgttgccgcacttgggcaaccaaagtgtgacaacttctcaggac
tatgacaaattcaaaatgatgatgttcatgattcgaaaactctatgcatttgttgctggc
gattgcgccgccgacaatcctgatgccatctctagccaggaagttctactcggtggattt
ctctatggaatgatcttgaaagagagacttgaagaatggctactatcttttggaaagttc
acgcgcgagtggtccacgagaggcggcaatcttaaatttaccgaccctttattcgaaaga
gatttcttagcaaaggttgtcaaacgaaccaacgagaatgtcggtggagcattagagtac
tttttgtcaacgggaaacctggtcagtccgacgggattggatatgcaacaggcttccggc
tataccgtcgtcgcagagaagatcaatttctatcgattcatcgcccacttccgcatgatt
cacagaggtagtttctttgctcagcttaaaaccaccgcagtgcgaaagttgcttcctgaa
agctggggcttcctctgccccgtccacacgcctgatggttctccgtgtgggttgctgaac
cacttggcacataaatgcttggttgccaccaaggatatcgatgtatctcaaatcccacgc
gttcttgcccagctgggtattcggtcagatgcttcggcggatgtgaatgagtctgtgaca
attcaactcaatgggcgcattgtcggctactgctcccccaagcaggcaaaaatgattcac
gataccctgcgattctggaaagtcgagggaacgcacgatattccgaaggagcttgagatt
ggttatgtgccaaactctaacggcggtcagtacccaggaatttacatgttctctcaggcg
gcgcgaatgtatcgacctgtcaagtacttggcgctcgacaaactcgactatgtcggtccc
ttcgaacagccatttatggagattgcatgcctggattccgacatcagatccggtatctcc
acgcatatcgaattcacgccaaccaacattttgtccatcctagccaatatgacgcccttc
tccgataataaccagtctcctcgtaacatgtaccaatgccaaatgagcaaacagaccatg
ggaaccccgggaacatccgttgcttatcgtacagacaacaagttgtaccgactacaatgt
ggccagactcctatcgttcggccgccgttgtataactcgtatgggttggacaacttccct
aacggcactaacgctgtcgttgctattatttcctacaccggttacgatatggacgacgct
atgattatcaacaaatcggcacacgagcgtggattcggtaatggaactatttataaaacc
aagttctacaacttggacgacaaggattcccgacgggccaagtctaagcgcgaaatctcc
aagctctttggctttgccccgggatcagagatcaaggctgagtggcggaatactttggac
gaggatggcttgcctcatgctggcgtcaaggtccaagaaggtactttgattgcagcctgg
catacggttcgctttgaccctgctagcgatacatacgtcaacgttgacgggcaaacgcat
ttcctcaaatacaaagatacggagaacggattcgttgacactattcgccttgtcggtaat
gagaacggaaatgagccacttcaagcgatcagtatcaaatatcgtatccctcgtcgaccc
attattggtgacaagttttcttctcgtcacggtcaaaagggtgtttgttcgcaaatgtgg
cctcagatcgatatgcctttctctgagaccggtattcaaccagacttgattatcaatcct
cacgctttcccatctcgtatgaccattgcgcagattatcgaatccatggctggcaaagcg
ggtactcttcacggccaccctcaagactgcacacccttccagttcagtgaagaaaacacg
gcggccgactattttggccaccagcttcgcaaggcaggatacaactaccacggaaatgag
ccgatgtacagtggtattaccggaaaggagtttgccgcagacatcttccttggtgttgtc
cactaccaacgtctacgtcacatggtgaacgataagttccaagtgcgtaccaccggtccg
gtcaacagcgtgacgggacaaccgatcaaaggtcgtgccaagggtggtggtattcgagtg
ggagaaatggaacgtgactctcttctggcccacggctgtgcattccttctgcaggaccga
ctgatgaactgctcggactcgcaacgtgcctggatctgccgggactgcggctcgttcctg
tctacccaagtcgccgtctcctcgctcggtgcccacaacgccagcaaactcgtcgcgaac
caaggcgcaatcgctgctgctgcacaggttgcgcccaaccaaaccacccccgtcagtggc
gtcggtgccgtcggcggcacaaacggtatagtccgctgtcgccgctgtgcgcgtgaagcc
gttttcgaggactcgcgcgccgacatctgggaagatggcgagggcaagcgcttcgtcgga
ggcgactctgccactgtcgtcgtcgtgcccggtgtgttgagatatctcgacgccgaattg
gccgcgatgggtatccggttgaaattcaaggttgaccattaa
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